Table 1.
Uncategorized microglia-associated genes dysregulated by ethanol exposure in the cerebellum. Genes were identified by cross-referencing our significantly (adjusted p < 0.05) differentially regulated gene list with the 822 microglia-associated genes extracted from previous studies [identified in [29,30,31,32,33]] (Supplemental Table S1A) using R statistical software, which identified 151 genes associated with microglia.
Symbol | LogFC | Adj. p | Symbol | LogFC | Adj. p | Symbol | LogFC | Adj. p | Symbol | LogFC | Adj. p | Symbol | LogFC | Adj. p |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
FOSB | 2.81 | 0.0081 | IFRD1 | 0.65 | 0.0001 | SLC25A5 | 0.27 | 0.0010 | CMTM6 | −0.21 | 0.0438 | PIK3CD | −0.50 | 0.0057 |
GPX3 | 2.68 | 1.77 × 10−9 | ZFP36 | 0.62 | 0.0027 | CCNL1 | 0.27 | 0.0035 | MKNK1 | −0.22 | 0.0422 | CTSS | −0.51 | 0.0005 |
CCL2 | 2.44 | 0.0015 | KLF4 | 0.60 | 0.0238 | FTL1 | 0.26 | 0.0021 | EDEM2 | −0.23 | 0.0235 | PLD4 | −0.52 | 0.0208 |
CDKN1A | 2.31 | 0.0007 | ANXA3 | 0.58 | 0.0021 | TMSB4X | 0.26 | 0.0037 | DOCK10 | −0.23 | 0.0350 | KCTD12 | −0.53 | 1.79 × 10−5 |
FCNA | 2.06 | 0.0028 | ARHGDIB | 0.54 | 0.0103 | PTBP1 | 0.23 | 0.0289 | RGS3 | −0.23 | 0.0465 | IFI203 | −0.54 | 0.0313 |
MAFF | 1.94 | 0.0002 | IER3 | 0.50 | 0.0012 | MYLIP | 0.23 | 0.0321 | TLN2 | −0.24 | 0.0188 | COL27A1 | −0.54 | 0.0433 |
CCL7 | 1.81 | 0.0025 | IER2 | 0.50 | 0.0318 | BRD2 | 0.23 | 0.0038 | SLC38A6 | −0.24 | 0.0467 | HPGDS | −0.60 | 0.0100 |
C5AR1 | 1.53 | 0.0044 | PROS1 | 0.48 | 0.0116 | KLF6 | 0.23 | 0.0368 | PLXDC2 | −0.24 | 0.0134 | UNC93B1 | −0.60 | 0.0014 |
GM3002 | 1.40 | 0.0405 | ICAM1 | 0.46 | 0.0449 | MCL1 | 0.21 | 0.0160 | RGL2 | −0.25 | 0.0089 | TREM2 | −0.62 | 0.0170 |
MSR1 | 1.34 | 0.0221 | CFH | 0.45 | 0.0092 | PCF11 | 0.21 | 0.0071 | PPCDC | −0.25 | 0.0401 | ITGAM | −0.65 | 0.0010 |
EVI2B | 1.25 | 0.0051 | LAIR1 | 0.45 | 0.0055 | CLTC | 0.21 | 0.0070 | SLC29A3 | −0.25 | 0.0314 | CCR5 | −0.67 | 0.0274 |
LYVE1 | 1.22 | 0.0164 | DUSP6 | 0.44 | 0.0070 | CYFIP1 | 0.20 | 0.0136 | ZFP90 | −0.25 | 0.0257 | SELPLG | −0.67 | 0.0003 |
UCP2 | 1.20 | 0.0088 | REL | 0.44 | 0.0343 | ZCCHC2 | 0.20 | 0.0245 | SLCO2B1 | −0.28 | 0.0484 | DSN1 | −0.68 | 0.0116 |
CSRNP1 | 1.10 | 8.39 × 10−6 | RGS2 | 0.43 | 0.0281 | FMNL1 | 0.19 | 0.0425 | CAMK1 | −0.28 | 0.0040 | IRF7 | −0.70 | 0.0273 |
APOC1 | 1.05 | 0.0009 | TSPO | 0.42 | 0.0433 | SERINC3 | 0.19 | 0.0467 | GPR155 | −0.28 | 0.0130 | APOBEC1 | −0.70 | 0.0296 |
SPP1 | 1.05 | 0.0315 | ZFP36L2 | 0.41 | 0.0021 | IL16 | 0.18 | 0.0149 | TLR3 | −0.30 | 0.0436 | HK2 | −0.77 | 0.0023 |
MERTK | 1.00 | 0.0348 | CD300A | 0.41 | 0.0117 | ARPC2 | 0.17 | 0.0203 | AKR1B10 | −0.30 | 0.0100 | IFI27L2A | −0.77 | 0.0403 |
F13A1 | 0.98 | 0.0109 | SAT1 | 0.41 | 0.0007 | PCNA | 0.17 | 0.0350 | UBC | −0.31 | 0.0056 | FGD2 | −0.83 | 0.0048 |
SERPINB8 | 0.97 | 0.0282 | 1700017B05RIK | 0.40 | 0.0163 | UBE2J1 | 0.17 | 0.0384 | AGO4 | −0.32 | 0.0367 | LY86 | −0.84 | 0.0002 |
KLF10 | 0.95 | 0.0022 | COTL1 | 0.39 | 0.0018 | ELMO1 | 0.16 | 0.0220 | APH1C | −0.35 | 0.0282 | FCRLS | −0.85 | 0.0032 |
ATF3 | 0.94 | 0.0077 | ATF4 | 0.39 | 0.0003 | SEMA4D | −0.16 | 0.0484 | EPB41L2 | −0.35 | 0.0016 | HPGD | −0.87 | 0.0004 |
HSPA1A | 0.92 | 0.0054 | SRGN | 0.37 | 0.0237 | ASAH1 | −0.17 | 0.0333 | LPCAT2 | −0.35 | 0.0344 | KLHL6 | −0.95 | 0.0173 |
ARHGAP27 | 0.83 | 0.0001 | ISYNA1 | 0.35 | 0.0247 | B2M | −0.17 | 0.0416 | ARHGAP11A | −0.37 | 0.0465 | SIGLECH | −0.98 | 0.0005 |
SOCS3 | 0.81 | 0.0258 | H3F3B | 0.33 | 0.0072 | LY6E | −0.19 | 0.0276 | HEXB | −0.38 | 0.0003 | OAS2 | −0.98 | 0.0095 |
GPNMB | 0.79 | 0.0039 | PPP1R15A | 0.31 | 0.0263 | TPP1 | −0.19 | 0.0097 | CSF1R | −0.42 | 0.0020 | P2RY12 | −1.10 | 0.0001 |
PHYHD1 | 0.78 | 1.08 × 10−5 | ARL4C | 0.30 | 0.0029 | SGPL1 | −0.20 | 0.0388 | MPEG1 | −0.42 | 0.0088 | CD74 | −1.18 | 0.0001 |
CD68 | 0.73 | 0.0096 | CCDC9 | 0.29 | 0.0047 | IL6ST | −0.20 | 0.0219 | GPR34 | −0.43 | 0.0433 | H2-AA | −1.55 | 0.0029 |
EGR1 | 0.72 | 0.0028 | HERPUD1 | 0.28 | 0.0076 | PMP22 | −0.20 | 0.0479 | CRYL1 | −0.44 | 0.0130 | |||
SPARC | 0.71 | 2.21 × 10−8 | SKI | 0.28 | 0.0104 | RRBP1 | −0.20 | 0.0274 | SALL1 | −0.45 | 0.0173 | |||
C3AR1 | 0.69 | 0.0154 | SERPINF1 | 0.28 | 0.0375 | AXL | −0.21 | 0.0334 | RENBP | −0.46 | 0.0219 | |||
SH2B2 | 0.68 | 0.0052 | PTPRJ | 0.27 | 0.0060 | COMMD8 | −0.21 | 0.0440 | P2RY13 | −0.48 | 0.0356 |