Table 1.
Summary of human clinically-normal epidermis and cSCC mutation datasets.
Name | Dataset | Source | Samples Sequenced |
Average Sequencing Depth |
Original Sequencing Panel Size | Sample Type | Panel Design |
---|---|---|---|---|---|---|---|
“Dataset A” | Test/Training Datasets | Fowler et al. [3] | 1261 | 690x | 0.39 Mb | Normal Epidermis (Head, forearm, leg, trunk, abdomen) | 74 Cancer- related genes |
“Dataset B” | Validation Dataset #1 |
Martincorena et al. [4] | 234 | 374x | 0.67 Mb | Normal Epidermis (Eyelid) |
74 Cancer- related genes |
“Dataset C” | Validation Dataset #2 |
Hernando et al. [2] | 123 | 923x | 0.32 Mb | Normal Epidermis (Back, chest, leg, upper arm, neck, face, hands) | 46 genes frequently mutated in skin cancer |
Test/Training Datasets | Pickering et al. [6] | 39 | 115x | - | Tumor | WES | |
Validation Dataset | Inman et al. [9] | 36 | 54x | - | Tumor | WES |