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Main ALLseq analytical performance.
| Alteration Type | Sensitivity | Specificity | PPV | NPV | Precision |
|---|---|---|---|---|---|
| SNVs and indels | 100% | 100% | 100% | 100% | 100% |
| CNVs (Cohen kappa coefficient = 0.88) |
88.87% | 97.92% | 92.85% | 95.91% | 96.45% |
| Fusions | 100% | 100% | 100% | 100% | 100% |
| Gene expression | 100% | 100% | 100% | 100% | 100% |
