α-SMA	Alpha smooth muscle actin
ABCA1	ATP binding cassette subfamily A member 1
ABCG1	ATP binding cassette subfamily G member 1
ACC	Acetyl-CoA carboxylase
AG	Alpha glucosidase
ALT1	Alanine transaminase
AGPAT1	1-acylglycerol-3-phosphate O-acyltransferase 1
Akt	AKT serine/threonine kinase 1
Apo A-I	Apolipoprotein A-I
Apo A-IV	Apolipoprotein A-IV
AMPK	Adenosine monophosphate activated protein kinase
ApoE	Apolipoprotein E
AP-1	Activator protein 1
AhR	Aryl hydrocarbon receptor
Atg7	Autophagy related 7 gene
ATP7B	ATPase copper transporting beta
Btd	Buttonhead box domain
Bmal1	basic helix-loop-helix ARNT Like 1
BA	Bile acids
Becn1	Beclin1
c/EBP	CCAAT-enhancer-binding proteins
ChREBP	Carbohydrate response element binding protein
CtBP	C-terminal-binding protein
CFU-E	Colony forming unit-Erythroid
CFU-MK	Colony forming unit-Megakaryocyte
CXCR4	C-X-C chemokine receptor type 4
CPS1	Carbamoyl-phosphate synthase 1
CYP450	Cytochrome P450
CYP1A1	Cytochrome P450 family 1 subfamily A member 1
CYP1A2	Cytochrome P450 family 1 subfamily A member 2
CYP2B10	Cytochrome P450, family 2, subfamily b, polypeptide 10
CYP2D6	Cytochrome P450 family 2 subfamily D member 6
CYP2E1	Cytochrome P450 family 2 subfamily E member 1
CYP3A4	Cytochrome P450 family 3 subfamily A member 4
CY4A10	Cytochrome P450, family 4, subfamily a, polypeptide 10
CYP4A14	Cytochrome P450, family 4, subfamily a, polypeptide 14
CYP7A1	Cytochrome P450 family 7 subfamily A member 1
CYP27A1	Cytochrome P450 family 27 subfamily A member 1
CYP13A8	C.elegans cytochrome P450 family 13 subfamily A member 8
CYP13A11	C.elegans cytochrome P450 family 13 subfamily A member 11
CYP33C9	C.elegans cytochrome P450 family 33 subfamily C member 9
CYP37A1	C.elegans cytochrome P450 family 37 subfamily A member 1
cAMP	3',5'-cyclic adenosine monophosphate
CREB	cAMP response element-binding protein
CCL4	Carbon tetrachloride
ChIP	Chromatin immunoprecipitation
CPT1A	Carnitine palmitoyltransferase 1A
CETP	Cholesteryl ester transfer protein
CA	Cholicacid
CDCA	Chenodeoxy cholicacid
CDX2	Caudal-type homeobox 2
c-MYC	MYC proto-oncogene
CSE	Cystathionine gamma-lyase
ccc DNA	Covalently closed circular DNA
DBP	D site of albumin promoter (albumin D-box) binding protein
DEX	Dexamethasone
DGAT1	Diacylglycerol O-acyltransferase 1
DDC	3,5-diethoxycarbonyl-1,4-dihydrocollidine
ESLD	End stage liver disease
EKLF	Erythroid Krüppel-like factor
EMSA	Electrophoretic mobility shift assay
eNOS	Endothelial nitric oxide synthase
ERG	ETS related gene
ETF	ETF transcription factor
E2F	E2F family of transcription factors
EMT	Epithelial–mesenchymal transition
ERK	Extracellular signal-regulated kinases
FOXA2	Forkhead Box A2
FOXO1	Forkhead box O1
FOXO3a	Forkhead box O3
Fam132a	Adipose-derived insulin-sensitizing factor; Adipolin
FGF15	Fibroblast growth factor 15
FGF21	Fibroblast growth factor 21
FASN	Fatty acid synthase
FBW7α	F-box and WD repeat domain containing 7
FATP	Fatty acid transport protein
FXR	Farnesoid X receptor
GATA1	GATA-binding factor 1
GATA4	GATA binding factor 4
GATA6	GATA-binding factor 6
GLUT2	Glucose transporter 2
GCK	Glucokinase
G6PC	Glucose 6-phosphatase
GPAT1	Glycerol-3-phosphate acyltransferase, mitochondrial
GSK-3β	Glycogen synthase kinase 3 beta
Gpbar1	G protein-coupled bile acid receptor 1
GST	Glutathione-s-transferase
HCC	Hepatocellular carcinoma
Hhex	Hematopoietically expressed homeobox
HNF4	Hepatocyte nuclear factor 4
HGF	Hepatocyte growth factor
HNF3β	Hepatocyte nuclear factor 3-beta
HFD	High fat diet
HDL	High density lipoprotein
HPD	4-hydroxyphenylpyruvate dioxygenase
HUVEC	Human umbilical vein endothelial cells
HULC	Hepatocellular carcinoma up-regulated long non-coding RNA
HBV	Hepatitis B virus
HFE	Homeostatic iron regulator
InsR	Insulin receptor
IRS-1	Insulin receptor substrate 1
iPSCs	Induced pluripotent stem cells
KLFs	Krüppel-like family of transcription factors
LXR	The liver X receptor
LDL	Low density lipoprotein
LCAT	Lecithin-cholesterol acyltransferase
LncRNA	Long noncoding RNA
MCAD	Medium-chain acyl-CoA dehydrogenase
MAPK	Mitogen-activated protein kinases
MALAT1	Metastasis associated lung adenocarcinoma transcript 1
MMP-1	Matrix metallopeptidase 1
MMP-9	Matrix metallopeptidase 9
NASH	Nonalcoholic steatohepatitis
NAFLD	Nonalcoholic fatty liver disease
NEFA	Non-esterified fatty acids
NAG	N-Acetylglutamate
NAGS	N-Acetylglutamate Synthetase
NR0B2	Nuclear receptor subfamily 0 group B member 2
NF-κB	Nuclear factor kappa B
NCOA3	Nuclear receptor coactivator 3
OSM	Oncostatin M
OTC	Ornithine transcarbamylase
OCT-4	Octamer-binding transcription factor 4
ODN	Oligodeoxynucleotides
PARP1	Poly ADP ribose polymerase 1
PGC-1α	Peroxisome proliferator-activated receptor-gamma coactivator (PGC)-1alpha
PPARα	Peroxisome proliferator-activated receptor alpha
PPARγ	Peroxisome proliferator-activated receptor gamma
PCK1	Phosphoenolpyruvate carboxykinase 1
PEPCK	Phosphoenolpyruvate carboxykinase
PI3K	Phosphoinositide 3-kinase
PRODH	Proline dehydrogenase
PSC	Primary sclerosing cholangitis
PAI-I	Plasminogen activator inhibitor 1
PON1	Paraoxonase 1
PCNA	Proliferating cell nuclear antigen
P53	Tumor protein P53
PDGF-β	Platelet derived growth factor-B
PXR	Pregnane X receptor
RORα	Retinoid-related orphan receptor alfa
RasGRP1	RAS guanyl releasing protein 1
RYBP	RING1 and YY1 binding protein
SREBF1	Sterol regulatory element binding transcription factor 1
SREBP-1C	Sterol regulatory element-binding protein 1
SP	Specificity protein
SOX17	SRY-Box transcription factor 17
SR-B1	The scavenger receptor, class B type 1
SCD1	Stearoyl-Coenzyme A desaturase 1
SSW	Sweetened sucrose water
SULT1A1	Sulfotransferase family 1A member 1
SULT2B1B	Sulfotransferase family 2B member 1
SOX-2	(Sex determining region Y)-box 2
SMAD3	SMAD family member 3
TAT	Tyrosine aminotransferase
TGs	Triglycerides
TDO2	Tryptophan 2,3-Dioxygenase
TGR-5	Takeda G protein-coupled receptor 5
TSS	Transcriptional start site
TM	Thrombomodulin
TF	Tissue factor
TGF-β	Transforming growth factor beta
TERT	Telomerase reverse transcriptase
TIMP-1	Tissue inhibitor matrix metalloproteinase 1
TNF-α	Tumor necrosis factor α
UPR	Unfolded protein response
UGT1A8	UDP glucuronosyltransferase family 1 member A8
UGT1A9	UDP Glucuronosyltransferase Family 1 Member A9
UGT1A10	UDP Glucuronosyltransferase Family 1 Member A10
VCAM-1VLDL	Vascular cell adhesion molecule-1Very low-density lipoprotein
WD	Wilsons disease
WNT	Proto-oncogene Wnt
WAT	White adipose tissue
XRE	Xenobiotic response element
YY1	Yin Yang 1
ZDHHC7	Zinc finger DHHC domain-containing protein 7
ZBP-89	Zinc-finger binding protein-89