Figure 6.
Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway and Gene Ontology (GO) enrichment analysis of differentially expressed genes (DEGs) as determined by RNA-seq
(A) The top 30 DEGs between ALS-PDC-affected and-unaffected cerebral organoids.
(B) and among ALS-PDC-unaffected, ALS-PDC-affected, and ALS-PDC-unaffected/BMAA-treated cerebral organoids.
(C) Significantly downregulated KEGG pathways between ALS-PDC-affected and-unaffected organoids.
(D) GO term enrichment analysis showing the downregulated biological processes between ALS-PDC-affected and-unaffected organoids.
(E and F) The expression of selected genes was validated by RT-qPCR. The data were analyzed using the Student’s t test in GraphPad Prism 8. All values were compared to the ALS-PDC-unaffected condition and expressed as means ± SEM. ∗p< 0.05, ∗∗p< 0.01. ∗∗∗p< 0.001,∗∗∗∗p< 0.0001.