TABLE 2.
Repeat type frequency of SSRs in the tested P. monodon transcriptome.
| Repeats | 5 | 6 | 7 | 8 | 9 | 10 | 11 | >11 | Total | % |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 bp | 0 | 0 | 0 | 0 | 0 | 9,207 | 4,273 | 10,250 | 23,730 | 46.04 |
| 2 bp | 0 | 5,161 | 3,289 | 2,645 | 3,163 | 2,909 | 898 | 85 | 18,150 | 35.21 |
| 3 bp | 4,044 | 2,361 | 1,576 | 147 | 4 | 2 | 1 | 6 | 8,141 | 15.79 |
| 4 bp | 1,278 | 129 | 9 | 2 | 1 | 1 | 2 | 11 | 1,433 | 2.78 |
| 5 bp | 23 | 3 | 3 | 1 | 2 | 0 | 0 | 6 | 38 | 0.07 |
| 6 bp | 14 | 5 | 5 | 5 | 1 | 4 | 8 | 10 | 52 | 0.10 |
| total | 5,359 | 7,659 | 4,882 | 2,800 | 3,171 | 12,123 | 5,182 | 10,368 | 51,544 | 100 |
| % | 10.40% | 14.86% | 9.47% | 5.43% | 6.15% | 23.52% | 10.05% | 20.11% | 100% | — |