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. 2023 Feb 10;51(5):2066–2086. doi: 10.1093/nar/gkad054

Figure 5.

Figure 5.

LTR transposon insertions are enriched in promoters and H3K36me3 ChIP-seq peaks, while P-element insertions are enriched in ATAC-seq peaks. (A) Normalized H3K36me3 ChIP-seq signal in the ±5 kb window centered on transposon insertions stratified into five groups: in the promoters of protein-coding genes, in the exons or introns of protein-coding genes, in intergenic regions, and in the promoters or bodies of noncoding genes. (B, C) Genome browser views of a 28-kb and a 52-kb region in D. melanogaster chromosome 2R and X. RNA-seq signal, gene annotation, transposon insertions, replication origins, ATAC-seq signal, H3K36me3 ChIP-seq signal, Pol II ChIP-seq signal and H3K4me4 signals are displayed from top to bottom.