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Proportion of variance in R2 that can be explained by different variables using type II sum of squares from ANOVA.
| Variable | Proportion of explained variance |
|---|---|
| Ancestry of summary statistics or test data | 0.5510 |
| Choice of LD reference panel | 0.1650 |
| Age of test individuals | 0.1590 |
| N individuals used to calculate summary statistics | 0.0195 |
| Residuals (unexplained variance) | 0.1050 |
