Table 3.
Genetic diversity estimates for Rana temporaria populations in the Province of Trento: results of eDNA metabarcoding from the present study compared to the reference dataset41.
Site | No haplotypes (n) | Haplotype div. (h) | Nucleotide div. (pi) | ||||||
---|---|---|---|---|---|---|---|---|---|
eDNA (T1) | eDNA (T1 + T2) | tissue DNA |
eDNA (T1) | eDNA (T1 + T2) | DNA | eDNA (T1) | eDNA (T1 + T2) | tissue DNA |
|
Amp | 2 | 2 | 2 | 0.368 | 0.428 | 0.533 | 0.001 | 0.001 | 9E-04 |
Bed | 3 | 3 | 3 | 0.543 | 0.545 | 0.378 | 0.009 | 0.01 | 0.005 |
Fia | 4 | 4 | 4 | 0.644 | 0.639 | 0.8 | 0.002 | 0.002 | 0.002 |
Ing | 2 | 2 | 2 | 0.121 | 0.352 | 0.351 | 0.001 | 0.004 | 0.003 |
Lel | 2 | 2 | 3 | 0.344 | 0.344 | 0.644 | 0.004 | 0.004 | 0.008 |
PLa | 3 | 3 | 2 | 0.349 | 0.349 | 0.356 | 0.009 | 0.009 | 0.008 |
PMa | 2 | 2 | 2 | 0.256 | 0.256 | 0.467 | 0.003 | 0.003 | 0.004 |
PS1 | 3 | 3 | 3 | 0.533 | 0.509 | 0.689 | 0.011 | 0.01 | 0.011 |
PS2 | 3 | 3 | 3 | 0.575 | 0.575 | 0.644 | 0.013 | 0.013 | 0.011 |
Va1 | 4 | 4 | 4 | 0.601 | 0.632 | 0.778 | 0.002 | 0.002 | 0.002 |
eDNA (T1): eDNA metabarcoding considering only T1 replicates; eDNA (T1 + T2): eDNA metabarcoding considering T1 + T2 replicates; tissue DNA: estimates from the reference dataset41.