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. 2022 Jan 27;2(1):e0000053. doi: 10.1371/journal.pgph.0000053

Table 1. Model parameters.

Symbol Parameter Units Baseline value Range Reference
S t=0 Initial susceptible prop Percent 99.9 NA NA
I t=0 Initial infected prop Percent 0.1 NA NA
R t=0 Initial removed prop Percent 0 NA NA
R 0 Base reproduction number New infections / infected indiv 2.4 2.0–2.8 NA
NPI t NPI intensity effect Unitless multiplier Varies 0–100 [15]
γ (Avg infec duration)−1 Days−1 14−1 NA [16]
VE S Vax effic vs infec Scalar 0.95 {0.95, 0} [17, 18]
VE I Vax effic vs trans Scalar 0.3 {0, 0.7} NA
VE P Vax effic vs progr Scalar 1.0 {0, 1.0} [17, 18]
P vac Final vax coverage Percent 50 {20, 50, 80} [2]
p rural Rural pop Percent 60 NA [13]
b Baseline migration Probability / time step 20 000 dtpmi 20–200 000 dtpmi NA
N tot Model agents Integer 4 × 105 NA NA
n rural Rural nodes Integer 199 NA NA
n urban Urban nodes Integer 1 NA NA
t Time step Days 1 NA NA