TABLE 2.
Growth characteristics of the classes Methanococci and Methanopyri and presence of genes for formate transport (FT), formate dehydrogenase (fdh), hydrogenases (eha, ehb, frh, vhu, hmd), and purine biosynthesis (purT, purP).
| Organism | Topt (°C) | Growth* | FT | fdh | eha | ehb | frh | vhu | hmd | purT | purP |
| Methanocaldococcus jannaschii JAL-1a | 85 | – | ⚫ | ⚫ | ⚫ | ⚫⚫ | ⚫ | ⚫⚫⚫ | ⚫ | ⚫ | |
| Methanocaldococcus bathoardescens JH146b | 82 | – | ⚫ | ⚫ | ⚫ | ⚫⚫ | ⚫ | ⚫⚫⚫ | ⚫ | ⚫ | |
| Methanocaldococcus fervens AG86c | 85 | ND | ⚫ | ⚫ | ⚫ | ⚫ | ⚫ | ⚫ | ⚫⚫ | ⚫ | ⚫ |
| Methanocaldococcus infernus MEd | 85 | – | ⚫ | ⚫ | ⚫ | ⚫ | ⚫ | ⚫ | ⚫ | ||
| Methanocaldococcus vulcanius M7e | 80 | – | ⚫ | ⚫ | ⚫ | ⚫⚫ | ⚫⚫ | ⚫⚫⚫ | ⚫ | ⚫ | |
| Methanotorris igneus Kol 5f | 88 | – | ⚫ | ⚫ | ⚫ | ⚫⚫⚫ | ⚫⚫ | ⚫⚫ | ⚫ | ⚫ | |
| Methanotorris formicicus Mc-S-70g | 75 | + | + | + | + | + | + | + | + | + | + |
| Methanothermococcus okinawensis IH1h | 65 | + | ⚫ | ⚫ | ⚫ | ⚫ | ⚫⚫ | ⚫⚫ | ⚫ | ⚫ | ⚫ |
| Methanothermococcus thermolithotrophicus SN 1i | 65 | + | + | + | + | + | + | + | + | + | + |
| Methanofervidicoccus abyssi HHBj | 70 | – | + | + | + | + | + | + | + | ||
| Methanopyrus kandleri AV19k | 98 | – | ⚫ | ⚫ | ⚫⚫ | ⚫ | ⚫ | ⚫ |
The number of circles per column represents the number of times the gene(s) for that complex appears in the organism’s genome.
*Growth on formate; ND, not determined.
+ In protein columns indicates genes present in draft genome sequence.
References and genome accession numbers: aJones et al. (1983a), L77117; bVer Eecke et al. (2013), CP009149; cZhao et al. (1988), CP001696; dJeanthon et al. (1998), CP002009; eJeanthon et al. (1999), CP001787; fBurggraf et al. (1990), CP002737; gTakai et al. (2004a), AGJL01000032; hTakai et al. (2002), CP002792; iHuber et al. (1982), AQXV01000039; jSakai et al. (2019), BFAX0000000; kKurr et al. (1991), AE009439.