Antibodies |
|
Cardiac troponin T |
Abcam |
Abcam Cat# ab8295; RRID:AB_306445
|
|
Chemicals, peptides, and recombinant proteins |
|
BMP4 |
Thermo Fisher |
PHC9531 |
Activin A |
Thermo Fisher |
PHC9564 |
IWR-1 |
STEMCELL Technologies |
72,564 |
Papain |
Sigma |
76,220 |
EDTA |
Roth |
804.2 |
|
Deposited data |
|
Raw and preprocessed data |
This paper |
GSE200277 |
Raw and preprocessed data |
Paper: PMC7763394 |
GSE157157 |
Human reference, GRCh38 (Ensembl 93) |
10X GENOMICS |
https://support.10xgenomics.com/ |
|
Experimental models: Cell lines |
|
Human embryonic stem cell ES02 |
Wicell, Madison, WI |
ES02 |
Skin fibroblast |
ATCC |
CRL-2522 |
|
Software and algorithms |
|
bcl2fastq |
Illumina |
https://emea.support.illumina.com/ |
R version 4.1.1 |
The R Project for Statistical Computing |
https://www.r-project.org/ |
CytoTRACE version 0.33 |
CytoTRACE |
https://cytotrace.stanford.edu/ |
Seurat version 4.0.5 |
SEURAT |
https://satijalab.org/seurat/ |
MetaNeighbor version 1.12.0 |
Bioconductor |
https://www.bioconductor.org/ |
Linnorm version 2.16.0 |
Bioconductor |
https://www.bioconductor.org/ |
Limma version 3.48.3 |
Bioconductor |
https://www.bioconductor.org/ |
DESeq2 version 1.32.0 |
Bioconductor |
https://www.bioconductor.org/ |
gprofiler2 version 0.2.1 |
CRAN |
https://cran.r-project.org/ |
rrvgo version 1.4.4 |
Bioconductor |
https://www.bioconductor.org/ |
LabVIEW |
In house |
PostTracking_HK2 |
Brainvision Analyzer |
Brain Products GmbH |
BV_Ana x64 v.16.04.20 |