Bacterial and Virus Strains |
|
BL21-AI competent cells |
ThermoFisher |
C607003 |
DH5a |
ThermoFisher |
18258012 |
NiCo21(DE3) Competent E. coli |
NEB |
C2529H |
BL21(DE3) cells |
NEB |
C25257H |
|
Chemicals, Peptides, and Recombinant Proteins |
|
Type IC Cas recombinant proteins |
This study |
N/A |
Anti-CRISPR IF2 recombinant protein |
This study |
N/A |
Anti-CRISPR IC4 recombinant protein |
This study |
N/A |
|
Critical Commercial Assays |
|
Q5 Site-Directed Mutagenesis Kit |
NEB |
E0554S |
Gibson Assembly Cloning Kit |
NEB |
E5510S |
Q5 High Fidelity 2X Master MIx |
NEB |
M0492S |
Q1Aprep Spin Miniprep Kit |
Qiagen |
27104 |
|
Deposited Data |
|
Type I-C Cascade Apo Structure |
This study |
EMD-27402PDB 8DEX |
Type I-C Cascade Partial R-loop Structure |
This study |
EMD-27403PDB 8DFA |
Type I-C Cascade Full R-loop Structure |
This study |
EMD-27939PDB 8DEJ |
Type I-C Cascade bound to AcrIF2 |
This study |
EMD-27412PDB 8DFS |
Type I-C Cascade bound to AcrIC4 |
This study |
EMD-27409PDB 8DFO |
Type I-C Cascade-Cas3 plasmid used for in vivo assay |
This study |
addgene #196400 |
Mendeley data |
This study |
https://doi.org/10.17632/spp853ngyh.1
|
AcrIC4 plasmid used for type I-C Cascade in vivo assay |
This study |
addgene #196403 |
AcrIF2 plasmid used for type I-C Cascade in vivo assay |
This study |
addgene #196402 |
type I-C Cascade target plasmid used for in vivo assay |
This study |
addgene #196399 |
|
Oligonucleotides |
|
Primers and DNA substrates |
Table S3
|
N/A |
|
Recombinant DNA |
|
Plasmids |
Table S2
|
N/A |
|
Software and Algorithms |
|
cryoSPARC |
Punjani et al.41
|
https://cryosparc.com/
|
LEGINON |
Suloway et al., 200542
|
https://nramm.nysbc.org/software/
|
WARP |
Tegunov et al.43
|
http://www.warpem.com/warp/
|
CHIMERAX |
Petterson et al.44
|
http://plato.cgl.ucsf.edu/chimerax/download.html
|
COOT |
Emsley et al.45
|
https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/
|
ISOLDE |
Croll et al.46
|
https://isolde.cimr.cam.ac.uk/
|
PHENIX |
Adams et al.47
|
https://phenix-online.org/
|
SerialEM |
Mastronarde48
|
https://bio3d.colorado.edu/SerialEM/
|
cryoSPARC Live |
Punjani et al.27
|
https://cryosparc.com/live
|
AlphaFold |
Varadi et al.26
|
https://github.com/deepmind/alphafold
|