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. 2023 Mar 3;40(3):msad052. doi: 10.1093/molbev/msad052

Fig. 2.

Fig. 2.

Evolution and recombination of PEDV strains of four geographical regions (China, South Korea, the US, and Europe). (A) The similarity and divergence of nucleotide sequences of six PEDV genes (ORF1a, ORF1b, spike, envelop, membrane, and nucleocapsid) among geographical region pairs. (BE) Maximum likelihood time-scaled phylogenetic trees of full PEDV genomes of four geographical regions: (B) China, (C) South Korea, (D) the US, and (E) Europe. The branches of G1 PEDV strains are highlighted. Different marks of the dots represent different administrative regions or countries. The x-axis represents the time in years. The inner plots showed the PP densities of the most recent common ancestor (TMRCA) of four geographical regions. (F) Breakpoint distributions of recombination events in PEDV strains of four geographical regions. PP, posterior probability.