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[Preprint]. 2023 Feb 24:2023.02.24.529899. [Version 2] doi: 10.1101/2023.02.24.529899

Table 3:

Top ten RP scoring genes.

BRCA LUAD LUSC PRAD LIHC

NNAT [48] LY6K [49] ENTPD6 [38] LRRC23 [50] ATP2A1 [51]
DPEP1 [52] OLAH [53] RASGEF1A [54] PRMT5 [45] TMEM253
CLEC4G [55] LYPD1 [56] SLCO1C1 [57] NTRK2 [58] GSTA4 [59]
CCDC102B [24] SLC13A4 [60] OR2W3 [61] ADAD2 [62] FLVCR1 [63]
GLYATL1 [64] CD244 [65] SH2D5 [66] FAM86B1 IGHMBP2 [67]
DLEU1 [68] TSACC B3GAT1 [69] TMEM178A CENPI [70]
ADRA2B [30] TMEM52 [71] SLC51B [72] ROPN1B [73] CHEK2 [74]
SPOCD1 [75] WDR62 [76] CITED1 [77] LRRC7 [50] RNF125 [78]
BATF2 [79] ELMO1 GNLY [80] LMX1B [81] AUNIP [82]
EPYC [83] PCDH7 [84] GAL C2orf73 OAZ3 [85]

The lists of the top 10 genes with the highest regulatory potentials (Equation (3)) in each cancer together with references to sample papers discussing their roles in cancer. In bold are references to papers that point to relations with the same cancer type. The regulatory potentials of the top predictors for the five cancers are provided at https://github.com/ncbi/TranNet.