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. 2023 Mar 20;29:36. doi: 10.1186/s10020-023-00625-6

Table 6.

Molecular docking parameters and results of seven active ingredients in LC binding with PYGM

Molecule name Vina scores Cavity size Center Size
x y z x y z
OIN  − 7.8 1837 5 23 29 21 21 27
Kukoamine A − 12.3 1598 31 24 30 36 36 36
Linarin  − 11.3 1598 31 24 30 24 24 24
Aurantiamide acetate  − 10.1 1598 31 24 30 29 23 23
Acacetin  − 10 1598 31 24 30 29 21 21
Apigenin  − 9.8 1598 31 24 30 29 21 21
Kulactone  − 8.9 1484 26 3 51 24 24 24
Emodin  − 8.9 1598 31 24 30 29 19 19
Scopolin  − 8.6 1598 31 24 30 29 21 21
Physcion  − 8.6 1598 31 24 30 29 20 20
Stigmasterol  − 8.5 1484 26 3 51 25 25 25
Lyciumin A  − 8.4 1484 26 3 51 28 28 28
Hederagenin  − 8.2 1484 26 3 51 25 25 25
Alexandrin  − 7.9 1837 5 23 29 29 29 29
Atropine  − 7.8 1837 5 23 29 21 21 27
Sugiol  − 7.7 1484 26 3 51 26 29 20
Beta-sitosterol  − 7.7 1484 26 3 51 23 29 23
Campesterol  − 7.7 1484 26 3 51 24 24 24
Linoleyl acetate  − 7 1598 31 24 30 29 29 29
HEPTACOSANE  − 7 1598 31 24 30 31 31 31
CLR  − 6.7 1598 31 24 30 36 36 36
Tricosane  − 6.4 1598 31 24 30 28 28 28