Table 1. DNA primers used in this study.
Target group | Target gene | Primer | Sequences(5’→3’) | Reference |
---|---|---|---|---|
SFGR*1 | gltA | gltA-F | CGAACTTACCGCTATTAGAATG | [17] |
gltA-R | CTTTAAGAGCGATAGCTTCAAG | |||
rOmpA | rOmpA-F | TGGTGGAGCTCATAAGTTACA | [12] | |
rOmpA-R | AGTTACATTTCCTGCACCTAC | |||
Ehrlichia | P28/omp1 | conP28-F1 | AT[C/T]AGTG[G/C]AAA[A/G]TA[T/C][A/G]T[G/A]CCAA | [18] |
conP28-R1 | CAATGG[A/G][T/A]GG[T/C]CC[A/C]AGA[A/G]TAG | |||
conP28-F2 | TTA[G/A]AA[A/G]G[C/T]AAA[C/T]CT[T/G]CCTCC | |||
conP28-R2 | TTCC[T/C]TG[A/G]TA[A/G]G[A/C]AA[T/G]TTTAGG | |||
Anaplasma | P44/msp2 | p3726 | GCTAAGGAGTTAGCTTATGA | [18] |
p3761 | CTGCTCT[T/G]GCCAA(AG)ACCTC | |||
p4183 | CAATAGT[C/T]TTAGCTAGTAACC | |||
p4257 | AGAAGATCATAACAAGCATTG | |||
Borrelia | flaB | flaB-F | GCTGAAGAGCTTGGAATGCAACC | [19] |
flaB-R | TGATCAGTTATCATTCTAATAGCA | |||
glpQ | glpQ-F | CATACGCTTATGCYTTRGGMGCTGA | ||
glpQ-R | GCAACCTCTGYCATACCTTCTTSTG | |||
16S rRNA | 16S_RT_F | GCTGTAAACGATGCACACTTGGT | [20] | |
16S _RT_R | GGCGGCACACTTAACACGTTAG | |||
BB_FAM | FAM-TTCGGTACTAACTTTTAGTTAA-NFQ-MGB | |||
BM_VIC | VIC-CGGTACTAACCTTTCGATTA-NFQ-MGB |
*1: SFGR (Spotted fever group rickettsiae).