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. 2023 Mar 21;14:1567. doi: 10.1038/s41467-023-37004-y

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© The Author(s) 2023

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 1 — a, b Resampling permutation test to identify the relationship between the number of genomes and all inversions and shared (non-genome specific) inversions, respectively; c Density of inversion lengths; d Bionano validation of inversions larger than 1 Mb, i.e., Clu-INV0100180, Clu-INV0100660, and Clu-INV0600550. In each panel, the top line shows the optical map used as a reference, the bottom line shows the genome assembly of the variety with the inversion. Gray lines connect restriction sites that are aligned (blue regions), while yellow segments show unaligned regions. Black boxes highlight the position each inversion. Source data are provided as a Source Data file.