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. 2023 Mar 21;14:1567. doi: 10.1038/s41467-023-37004-y

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© The Author(s) 2023

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 2 — a Chromosome distribution of the pan-genome inversion index, and inversion hotspots. Chromosome heatmaps in the middle along the chromosome represent the density of inversions. The line on the left of each chromosome represents the number of inversions per 200 Kb window. The red dotted line cut off is the top 2% number of inversions in per 200 Kb window. The blue boxes on the right of each chromosome represents the inversion hotspot regions. b The Kolmogorov–Smirnov (KS) test for inversion uniformity distribution across the 12 rice chromosomes. The black line is actual inversion distribution, and the red line is the 10,000^th uniformly distributed simulation. Source data are provided as a Source Data file.