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. 2023 Mar 22;10(3):221503. doi: 10.1098/rsos.221503

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© 2023 The Authors.

Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/, which permits unrestricted use, provided the original author and source are credited.

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Figure 4. — GLM response curves showing (a) Type I error rate with and without Clade C. (b) The detection rate at ϕ = 0.75. The 95% confidence interval is indicated by the shaded area. The dotted line indicates the threshold used to assess GWAS significance, p < 0.0001. In (a), the GLM was conducted using the mean allele frequency of 0.4 and represents 60 000 replicates for each dataset. In (b), the GLM was conducted using the mean λ_A of 0.3 and represents 6000 replicates for each dataset.