Table 1. Variant distribution among the 1,141 SARS-CoV-2 samples sequenced.
| Nextclade Clade assigned | Pangolin lineages assigned | Numbers (%) | ||
| 21K | B.1.1.529 | 01 (0.09%) | ||
| 21L | BA.2 | 12 (1.05%) | ||
| 21L | BA.2.10 | BA.2.10* | 01 (0.09%) | 32 (2.80%) |
| BA.2.10.1 | 26 (2.28%) | |||
| BA.2.10.4 | 04 (0.35%) | |||
| BJ.1 | 01 (0.09%) | |||
| 22C | BA.2.12.1 | 01 (0.09%) | ||
| BA.2.3.20 | 02 (0.18%) | |||
| 21L | BA.2.38 | BA.2.38* | 03 (0.26%) | 45 (3.94%) |
| BA.2.38.1 | 02 (0.18%) | |||
| BA.2.38.2 | 03 (0.26%) | |||
| BA.2.38.3 | 01 (0.09%) | |||
| BH.1 | 36 (3.16%) | |||
| 21L | BA.2.74 | 02 (0.18%) | ||
| 22D | BA.2.75 | BA.2.75* | 93 (8.15%) | 581 (50.92%) |
| BA.2.75.1 | 69 (6.05%) | |||
| BA.2.75.2 | 109 (9.55%) | |||
| BA.2.75.3 | 07 (0.61%) | |||
| BA.2.75.5 | 05 (0.44%) | |||
| BA.2.75.6 | 14 (1.23%) | |||
| BA.2.75.7 | 17 (1.49%) | |||
| BA.2.75.9 | 01 (0.09%) | |||
| BL.1 | 36 (3.16%) | |||
| BL.2 | 13 (1.14%) | |||
| BL.3 | 02 (0.18%) | |||
| BM.1 | 13 (1.14%) | |||
| BM.1.1 | 63 (5.52%) | |||
| BM.1.1.1 | 04 (0.35%) | |||
| BM.1.1.3 | 09 (0.79%) | |||
| BM.4.1 | 06 (0.53%) | |||
| BM.4.1.1 | 17 (1.49%) | |||
| BN.1 | 29 (2.54%) | |||
| BN.1.1 | 01 (0.09%) | |||
| BN.1.3 | 02 (0.18%) | |||
| BN.1.3.1 | 02 (0.18%) | |||
| BN.1.4 | 09 (0.79%) | |||
| BR.2.1 | 02 (0.18%) | |||
| BY.1 | 43 (3.77%) | |||
| CA.2 | 01 (0.09%) | |||
| CA.3 | 02 (0.18%) | |||
| CH.1 | 01 (0.09%) | |||
| CH.1.1 | 11 (0.96%) | |||
| 21L | BA.2.76 | 07 (0.61%) | ||
| 21L | BA.2.83 | 01 (0.09%) | ||
| 22B | BA.5 | BA.5* | 02 (0.18%) | 37 (3.24%) |
| BA.5.2 | 11 (0.96%) | |||
| BA.5.2.1 | 06 (0.53%) | |||
| BA.5.6 | 01 (0.09%) | |||
| BA.5.9 | 01 (0.09%) | |||
| BE.1.1 | 03 (0.26%) | |||
| BF.7 | 03 (0.26%) | |||
| BF.7.6 | 01 (0.09%) | |||
| BF.14 | 01 (0.09%) | |||
| BF.26 | 03 (0.26%) | |||
| BF.27 | 01 (0.09%) | |||
| BF.3 | 03 (0.26%) | |||
| BF.33 | 01 (0.09%) | |||
| 22E | BQ.1 | BQ.1* | 02 (0.18%) | 15 (1.31%) |
| BQ.1.1 | 05 (0.44%) | |||
| BQ.1.1.18 | 01 (0.09%) | |||
| BQ.1.1.22 | 01 (0.09%) | |||
| BQ.1.1.4 | 01 (0.09%) | |||
| BQ.1.2 | 02 (0.18%) | |||
| BQ.1.9 | 03 (0.26%) | |||
| 22F | XAR | Recombinant | 01 (0.09%) | |
| XBF | 02 (0.18%) | |||
| XBB | XBB* | 70 (6.13%) | 172 (15.07%) | |
| XBB.1 | 41 (3.59%) | |||
| XBB.1.5 | 07 (0.61%) | |||
| XBB.2 | 31 (2.72%) | |||
| XBB.3 | 22 (1.93%) | |||
| XBB.5 | 01 (0.09%) | |||
| Not assigned | Not assigned (QC failure) | 230 (20.16%) | ||
| Grand total | 1141 (100%) | |||