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. 2023 Feb 13;4(3):100945. doi: 10.1016/j.xcrm.2023.100945
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

Rat-anti-IGFBP2 R&D systems Cat# MAB7971; RRID:AB_2264598
Rabbit anti-IGFBP2 for IHC Abcam Cat# ab188200
Rabbit anti-P21 Abcam Cat# ab188224; RRID:AB_2734729
Rabbit anti-Collagen 1 EMD Millipore Cat# AB765P; RRID:AB_92259
Rabbit anti-PPARα LSBio Cat# LS-C312574
Rabbit anti-Fibronectin Abcam Cat# ab2413; RRID:AB_2262874
Rabbit anti-Vimentin CST Cat# 5741S; RRID:AB_10695459
HRP conjugated-β actin Santa Cruz Cat# sc-47778HRP; RRID:AB_2714189
Mouse anti-α tubulin CST Cat# 3873; RRID:AB_1904178
Rabbit anti-H3 Histone CST Cat# 4499; RRID:AB_10544537
Rabbit anti-phospho-Histone 2AX CST Cat# 2577; RRID:AB_2118010
Rabbit anti-Prosurfactant Protein C Abcam Cat# ab211326; RRID:AB_2927746

Bacterial and virus strains

Ad-Null Vector Biolabs Cat#1240
Ad-m-TGFβ1 Vector Biolabs Cat#ADV-274099
mouse Igfbp2 lentiviral particle Origene Cat#: MR204287L3V
Lenticontrol particles Origene Cat# PS100092V

Chemicals, peptides, and recombinant proteins

human IGFBP2 recombinant protein R&D Systems Cat# 797-B2-025
Bleomycin EMD Millipore Cat# 203401
DMSO Sigma- Aldrich Cat# D8418
4% PFA Santa Cruz Cat# sc-281692
DMEM/F12 Gibco Cat# 11-320-033
Plasmocin invivogen Cat# ant-mpp
Collagenase type 1 Worthington Biochemical Cat# LS004197
Dispase Corning Cat# 354235
Green chromogen Leica Cat# DC9913
Bond polymer refine system Leica Cat# DS9800
BondTM Primary antibody diluent Leica Cat# AR9352
BOND Epitope Retrieval Solution 1 Leica Cat# AR9961
BOND Epitope Retrieval Solution 2 Leica Cat# AR9640
Wash solution 10X concentration Leica Cat# AR9590
BOND Universal Covertile Leica Cat# S21.4611
Tween-20 Sigma- Aldrich Cat# P9416
PVDF membrane EMD Millipore Cat# IPVH00010
SuperSignalTM Pico or Femto substrate Thermo Fisher Scientific Cat# 34095
RIPA buffer Thermo Fisher scientific Cat# 89901
Igfbp2 Life science technology Hs01040719_m1
18S rRNA Life science technology Hs99999901_s1
Pparα Life science technology Mm00440939_m1 and Hs00231882_m1
Igfbp2 siRNA Horizon Discovery L-062198-01-0005
Pparα siRNA Santa Cruz sc-36308

Critical commercial assays

High-Capacity RNA-to-cDNA™ Kit Thermo Fisher scientific Cat# 4387406
TaqMan™ Fast Advanced Master Mix Thermo Fisher scientific Cat# 44-445-56
Hydroxyproline assay Cell Biolab Cat# STA-675
Βeta-galactosidase activity assay Biovision Cat# K821- 100
RT2 profiler PCR assay Qiagen Cat# PAMM-050ZC-6
IGFBP2 ELSA assay R&D systems Cat# DY797
BCA protein assay Thermo Fisher Scientific Cat# 23227

Experimental models: Cell lines

MLE-12 ATCC CRL-2110

Experimental models: Organisms/strains

Igfbp2flx/flxtransgenic mouse Leeds University
Sftpc-CreERT2 The Jackson Laboratory RRID#IMSR_JAX:028054
C57BL6/J The Jackson Laboratory RRID#IMSR_JAX:000664

Oligonucleotides

IL-1βCCH PrimerBank ID 6680415a1 5′-GCAACTGTTCCTGAACTCAACT-3′
and 5′-ATCTTTTGGGGTCCGTCAACT-3′
IL-4 PrimerBank ID 10946584a1 5′- GGTCTCAACCCCCAGCTAGT-3′
5′- GCCGATGATCTCTCTCAAGTGAT-3′
IL-6 PrimerBank ID 13624311a1 5′-TAGTCCTTCC-3′
5′-TACCCCAATTTCC-3′
MCP-1 PrimerBank ID 6755430a1 5′- TTAAAAACCTGGATCGGAACCAA-3′
5′- GCATTAGCTTCAGATTTACGGGT-3′
STAT-3 PrimerBank ID 13277852a1 5′- CAATACCATTGACCTGCCGAT-3′
5′- GAGCGACTCAAACTGCCCT-3′
STAT6 PrimerBank ID 6678155a1 5′- CTCTGTGGGGCCTAATTTCCA-3′
5′- CATCTGAACCGACCAGGAACT-3′
TNF-α PrimerBank ID 7305585a1 5′- CCCTCACACTCAGATCATCTTCT-3′
5′- GCTACGACGTGGGCTACAG-3′

Software and algorithms

ImageJ 1.53t FIJI https://imagej.nih.gov/ij/
Graphpad Prism 9.0 Graphpad software LLC https://www.graphpad.com