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. Author manuscript; available in PMC: 2023 Apr 5.
Published in final edited form as: IEEE Trans Vis Comput Graph. 2022 Dec 16;29(1):106–116. doi: 10.1109/TVCG.2022.3209378

Fig. 3: Visinity Workflow:

Fig. 3:

(a) Neighborhood quantification: users choose a spatial range triggering neighborhood vector computation; (b) Browse cohort: small multiples of specimen to gain an overview of neighborhood patterns; (c) Bottom-up analysis: explore spatial arrangements and cell-type composition of neighborhoods, generate hypotheses, cluster, and extract patterns; (d) Top-down analysis: two visual querying capabilities allow hypothesis generation and search for similar patterns; (e) Pattern annotation and comparison within and across datasets.