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. 2023 Mar 14;14:1129471. doi: 10.3389/fmicb.2023.1129471

Table 1.

Topological properties of the empirical molecular ecological networks of microbial communities in groups.

Network metrics Type
Herbage Shrub Arbor Soil
Number of nodes 533 401 393 754
Number of edges 10,088 6,815 5,233 16,743
Number of positive correlations 5,350 3,738 2,764 11,213
Number of negative correlations 4,738 3,077 2,469 5,530
Ratio of positive to negative correlations 1.129 1.215 1.119 2.028
Average connectivity (avgK) 18.927 16.995 13.316 22.206
Average path distance (GD) 2.224 2.206 2.309 2.640
Average clustering coefficient (avgCC) 0.278 0.311 0.262 0.546
Graph density 0.071 0.085 0.068 0.059
Number of modulesa 9 9 12 17
Modularity 0.285 0.318 0.352 0.648
a

Number of modules with ≥ 5 nodes in the networks.