Table 6.
Molecular dynamic simulation result of selected hits (selexipag and pralatrexate) and linoleic acid with double mutant form (double mutant E484Q and L452R)
| Drug name | RMSD | RMSF | Interactions |
|---|---|---|---|
| LA | 3.19±0.52 | 1.44±1.01 | A: GLN409, ARG408, LYS417, THR415 B: |
| Selexipag (DB011362) | 4.16±0.97Å | 1.53±2.04Å | A: GLN409, ARG408, LYS417, THR415, ASP405 B: PHE374, TYR365 |
| Pralatrexate (db006813) | 3.08±0.39 | 1.33±0.93 | A: GLN409, ARG408, LYS417, ARG403, THR415, GLU406 B: PHE374, SER371, LEU368, ALA372, ala363 |
LA=Linoleic acid, RMSD=Root-mean-square deviation, RMSF=Root mean square fluctuation