Table 1.
Diversity statistics for Vietnamese dogs.
| Regions | ABC (DEF) | nA (%) | nB (%) | nC (%) | nE (%) | nHT | nHTres44 | HTuq | Haplotype Diversity | Nucleotide Diversity | Mean of Pairwise Differences |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Total | 394 (35) | 232 (54.1) | 97 (22.6) | 65 (15.2) | 35 (8.2) | 56 | 18.96 (± 2.32) | 14 | 0.9210 ± 0.0065 | 0.014819 ± 0.007586 | 8.639566 ± 3.998569 |
| SVN | 284 (34) | 153 (48.1) | 75 (23.6) | 56 (17.6) | 34 (10.7) | 31 | 15.16 (± 1.28) | 3 | 0.8994 ± 0.0079 | 0.014596 ± 0.007486 | 8.509454 ± 3.945443 |
| Rach Gia | 78 (5) | 49 (59) | 15 (18.1) | 14 (16.9) | 5 (6) | 18 | 1 * | ||||
| Ha Tien | 15 (0) | 8 (53.3) | 5 (33.3) | 2 (13.3) | 0 (0) | 7 | 0 | ||||
| Phu Quoc | 118 (15) | 56 (42.1) | 39 (29.3) | 23 (17.3) | 15 (11.3) | 17 | 1 * | ||||
| Soc Trang | 21 (0) | 12 (57.1) | 4 (19) | 5 (23.8) | 0 (0) | 14 | 1 | ||||
| Binh Duong | 7 (0) | 6 (85.7) | 1 (14.3) | 0 (0) | 0 (0) | 4 | 0 | ||||
| Ho Chi minh city | 45 (14) | 22 (37.3) | 11 (18.6) | 12 (20.3) | 14 (23.7) | 17 | 1 | ||||
| CVN | 44 (0) | 23 (52.3) | 15 (34.1) | 6 (13.7) | 0 (0) | 23 | 23 | 5 | 0.9154 ± 0.0327 | 0.015095 ± 0.007880 | 8.800211 ± 4.137619 |
| Lam Dong | 26 (0) | 12 (46.2) | 9 (34.6) | 5 (19.2) | 0 (0) | 12 | 2 * | ||||
| Hoi An | 3 (0) | 2 (66.7) | 0 (0) | 1 (33.3) | 0 (0) | 12 | 0 | ||||
| Hue | 15 (0) | 9 (60) | 6 (40) | 0 (0) | 0 (0) | 3 | 3 | ||||
| NVN | 55 (0) | 50 (90.9) | 3 (5.5) | 2 (3.6) | 0 (0) | 26 | 22.4 (± 1.41) | 7 | 0.9219 ± 0.0242 | 0.009830 ± 0.005304 | 5.721212 ± 2.782501 |
| Sapa | 9 (0) | 9 (100) | 0 (0) | 0 (0) | 0 (0) | 7 | 0 | ||||
| Bac Ha | 15 (0) | 14 (93.3) | 1 (6.7) | 0 (0) | 0 (0) | 11 | 2 | ||||
| Hmong | 31 (0) | 27 (87.1) | 2 (6.5) | 2 (6.5) | 0 (0) | 15 | 5 | ||||
| Other | 11 (1) | 6 (50) | 4 (33.3) | 1 (8.3) | 1 (8.3) | 8 | 0 |
ABC (DEF): the number of sequences belonging to the haplogroups A, B, and C (E, D, and F); nA (%), nB (%), nC (%), nE (%): the number of sequences (the percentages) belonging to haplogroups A, B, C, and E; nHT: number of haplotypes; nHTres44: number of haplotypes with sample size adjusted to 44; HTuq: * share one unique haplotype Cn2.