Table 2.
AQP transcript expression levels in cortical regions differ from those in the hippocampal formation. Differential expression analysis of AQPs in the (i) PCx and (ii) TCx as compared with HIP for subjects in the combined C and AC groups. The average expression (AveExpr) was determined by averaging all RNAseq levels over all probes used for the indicated gene. t-values represent the test statistic associated with the comparison of the two means using two-sample t-tests, with positive values indicating a larger average RNAseq in the cortical region compared to the hippocampus. p values were adjusted (Adj P) for multiple tests using the Bonferroni correction, with significant differences indicated as p < 0.05.
(i) PCx | Gene | logFC | AveExpr | t | p Value | adj. p Val |
---|---|---|---|---|---|---|
Higher expression | ||||||
AQP11 | 1.2660 | −0.1312 | 6.8948 | <0.001 | <0.001 | |
Lower expression | ||||||
AQP3 | −1.8606 | 0.2854 | −13.497 | <0.001 | <0.001 | |
AQP1 | −1.1530 | −0.2480 | −8.046 | <0.001 | <0.001 | |
AQP4 | −0.8933 | 0.0305 | −4.396 | <0.001 | 1 × 10−4 | |
AQP10 | −0.5890 | 0.2891 | −3.164 | 0.0022 | 0.0058 | |
AQP9 | −0.5273 | 0.1916 | −2.441 | 0.017 | 0.0368 | |
No significant difference | ||||||
AQP5 | −0.3550 | −0.0021 | −1.954 | 0.0544 | 0.0911 | |
AQP2 | −0.3983 | 0.2462 | −1.940 | 0.0561 | 0.0911 | |
AQP0 | −0.2684 | 0.0776 | −1.362 | 0.1773 | 0.2561 | |
AQP8 | 0.1785 | 0.2422 | 1.0513 | 0.2964 | 0.3854 | |
AQP12 | 0.1078 | 0.2901 | 0.3748 | 0.7088 | 0.8377 | |
AQP7 | 0.0299 | 0.2040 | 0.1616 | 0.8721 | 0.9448 | |
AQP6 | 0.0129 | −0.2175 | 0.0623 | 0.9505 | 0.9505 | |
(ii) TCx | Gene | logFC | AveExpr | t | p Value | adj. p Val |
Higher expression | ||||||
AQP11 | 0.8442 | -0.1312 | 4.6514 | <0.001 | <0.001 | |
Lower expression | ||||||
AQP3 | −1.8251 | 0.2854 | −13.39 | <0.001 | <0.001 | |
AQP1 | −1.3989 | −0.2480 | −9.876 | <0.001 | <0.001 | |
AQP4 | −0.9932 | 0.0305 | −4.945 | <0.001 | <0.001 | |
AQP9 | −0.6515 | 0.1916 | −3.051 | 0.0031 | 0.0082 | |
AQP10 | −0.5451 | 0.2891 | −2.963 | 0.0041 | 0.0088 | |
No significant difference | ||||||
AQP0 | −0.4008 | 0.0776 | −2.057 | 0.0431 | 0.0801 | |
AQP5 | −0.3258 | −0.0021 | −1.814 | 0.0737 | 0.1197 | |
AQP2 | −0.3557 | 0.2462 | −1.753 | 0.0837 | 0.1208 | |
AQP12 | −0.3756 | 0.2901 | −1.321 | 0.1904 | 0.2475 | |
AQP8 | 0.1857 | 0.2422 | 1.106 | 0.2721 | 0.3216 | |
AQP6 | −0.2120 | −0.2175 | −1.039 | 0.302 | 0.3271 | |
AQP7 | −0.0685 | 0.2040 | −0.375 | 0.7086 | 0.7086 |