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. 2023 Mar 12;11(3):865. doi: 10.3390/biomedicines11030865

Table 1.

Primer sequences and amplification programs.

Gene Primer Sequences Conditions Product
Size (bp)
IL-6 5′-ATGAACTCCTTCTCCACAAGCGC-3′
5′-GAAGAGCCCTCAGGCTGGACTG-3′
5″ at 95 °C, 13″ at 56 °C, 25″ at 72 °C for 40 cycles 628
IL-8 5′-ATGACTTCCAAGCTGGCCGTG-3′
5′-TGAATTCTCAGCCCTCTTCAAAAACTTCTC-3′
5″ at 94 °C, 6″ at 55 °C, 12″ at 72 °C for 40 cycles 297
IL-1α 5′-CATGTCAAATTTCACTGCTTCATCC-3′
5′-GTCTCTGAATCAGAAATCCTTCTATC-3′
5″ at 95 °C, 8″at 55 °C, 17″ at 72 °C for 45 cycles 421
TNF-α 5′-CAGAGGGAAGAGTTCCCCAG-3′
5′-CCTTGGTCTGGTAGGAGACG-3′
5″ at 95 °C, 6″ at 57 °C, 13″ at 72 °C for 40 cycles 324
TGF-β 5′-CCGACTACTACGCCAAGGAGGTCAC-3′
5′-AGGCCGGTTCATGCCATGAATGGTG-3′
5″ at 94 °C, 9″ at 60 °C, 18″ at 72 °C for 40 cycles 439
HBD-2 5′-GGATCCATGGGTATAGGCGATCCTGTTA-3′
5′-AAGCTTCTCTGATGAGGGAGCCCTTTCT-3′
5″ at 94 °C, 6″ at 63 °C, 10″ at 72 °C for 50 cycles 198
Occludin 5′-TCAGGGAATATCCACCTATCACTTCAG-3′
5′-CATCAGCAGCAGCCATGTACTCTTCAC-3′
10″ at 95 °C, 45″ at 60 °C for 40 cycles 188
Zonulin-1 5′-AGGGGCAGTGGTGGTTTTCTGTTCTTTC-3′
5′-GCAGAGGTCAAAGTTCAAGGCTCAAGAGG-3′
10″ at 95 °C, 45″ at 60 °C for 40 cycles 217
Claudin-1 5′-CTGGGAGGTGCCCTACTTTG-3′
5′-ACACGTAGTCTTTCCCGCTG-3′
1″ at 95 °C, 30″ at 60 °C, 20″at 72 °C for 40 cycles 128