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. 2023 Mar 21;11(3):969. doi: 10.3390/biomedicines11030969

Table 1.

Summary of best c-MYC G4 ligands’ characteristics.

Binding to c-MYC G4 Anticancer Activity
Group Strength
(Kd, Ka, ΔTm)
Preference for c-MYC G4
(Yes/No)
In Vitro In Vivo Ref.
Macrocycles 1 No
  • Reduces telomerase activity.

  • Decreases c-MYC and hTERT expression.

  • Inhibits cancer cell growth.

  • Inhibits tumor growth in two xenograft tumor models.

[55,56]
3 ΔTm = 17.2 °C No
  • Decreases c-MYC expression.

  • Decreases Pif1 helicase activity.

  • Cytotoxicity activity (IC50 < 0.01 µM) in MCF-7 cells.

[58,59]
Ligands with four or more fused aromatic rings 4 Yes
  • Decreases c-MYC expression.

  • Antiproliferative activity in cancer cells (IC50 = 0.24–4.8 µM).

[63]
5 ΔTm = 26.6 °C __
  • Decreases c-MYC expression.

  • Cytotoxicity activity (IC50 of 4.7 µM) in Burkitt’s lymphoma (RAJI) cell line.

  • Inhibits tumor growth in a Burkitt’s lymphoma xenograft model.

[61]
6
7
ΔTm = 7 °C
ΔTm = 17 °C
No
  • Cytotoxicity activity (IC50 2.3–3.1 µM) in RAJI cell lines.

[64]
8
9
10
ΔTm = 22.0 °C
ΔTm = 16.6 °C
ΔTm = 13.7 °C
Yes
  • Decrease c-MYC expression.

  • Cytotoxicity activity (IC50 = 0.02–5.53 µM) for different cancer cell lines.

  • Compound 10 significantly decreases tumor growth in a lung cancer xenograft model.

[65]
12 ΔTm = 21 °C __
  • Decreases c-MYC expression.

[69]
13 ΔTm > 15 °C __
  • Specific toxicity against BRCA1/2-deficient cells.

  • Inhibits RNA-polymerase I activity and the formation of nucleolin/G4 complexes.

  • Decreases c-MYC expression and induces apoptosis.

Reached Phase II clinical trial. [73,76]
14 ΔTm > 15 °C No
  • Specific toxicity against BRCA1/2-deficient cells.

  • Inhibits RNA polymerase I and Topoisomerase II.

  • Induces G4-mediated DNA damage.

  • Phase I clinical trial.

[81,131]
15
ΔTm = 4.4 °C __
  • Decreases c-MYC expression.

  • Cytotoxicity activity (IC50 = 1.1 μM) in CNE-1 cells.

  • Inhibits tumor growth of CNE-1 cells in zebrafish xenograft model.

[82]
16 - No
  • Decreases c-MYC expression in mRNA.

  • Cytotoxicity activity in different cell lines.

  • Phase I clinical trial for acute myelogenous leukemia.

[83,85,86]
17
18
ΔTm ~ 10 °C Yes
  • Inhibits lymphoma cell growth.

[87]
19 ΔTm = 16.4 °C No
  • Decreases the expression of c-MYC and BCL-2.

  • Causes telomere uncapping.

  • Cytotoxicity activity in different cell lines.

  • Inhibits tumor growth in a metastatic lymph node cell in mice xenograft model.

[88,89]
20 ΔTm > 6 °C No
  • Decreases the expression of c-MYC and HIF1α.

  • Inhibits tumor growth in a colon cancer mouse model.

[91]
21 ΔTm = 29 °C Yes
  • Decreases c-MYC expression.

  • Cytotoxicity activity in NCI cells (IC50 = 4 µM).

[92]
Ligands with three fused aromatic rings 22 Yes
  • Decreases c-MYC level by 25–40% in Ramos cells.

- [95]
24 ΔTm = 12.8 °C No
  • Decreases c-MYC and BCL2 expression.

  • Cytotoxicity activity in Jurkat human T lymphoblastoid cells (IC50 = 17.0 µM).

[96]
26 ΔTm = 20 °C Yes
  • Decreases c-MYC expression.

  • Cytotoxicity activity in different cancer cell lines (IC50 = 2.1–4.2 µM).

  • Inhibits tumor growth in cervical squamous cancer in nude mice xenograft model.

[97]
27
28
ΔTm = 4 °C
ΔTm = 1.9 °C
Yes
  • Decreases c-MYC expression.

  • Cytotoxicity activity in different cancer cell lines.

[98,99]
29 ΔTm= 15.8 °C Yes
  • Cytotoxicity activity in HeLa (IC50 = 3.4 µM) and in HCT116 (IC50 = 3.2µM) cells.

[100]
31 Kd = 0.17 µM __
  • Decreases c-MYC expression.

  • Cytotoxicity activity in HCT116 cells (IC50 = 2.1 µM).

[102]
34 ΔTm = 23.4 °C __
  • Decreases c-MYC expression.

  • Cytotoxicity activity in HeLa (IC50 = 2.5 µM) and in A549 (IC50 = 6.4 µM) cells.

[103]
37 Kd = 36 nM Yes
  • Decreases c-MYC expression.

[104]
38 ΔTm = 15.0 °C __
  • Decreases c-MYC expression.

  • Downregulates RNA polymerase I transcription.

  • Antiproliferative activity in different cancer cell lines.

[107]
Ligands with two fused aromatic rings 39 ΔTm = 23.7 °C __
  • Decreases c-MYC expression.

  • Inhibits tumor growth in liver cancer in nude mouse xenograft model.

[108]
40 ΔTm = 9 °C __
  • Decreases c-MYC expression.

  • Showed good binding affinity to NM23-H2 protein (KD = 5.29 µM).

[109]
41
42
ΔTm = 12.1 °C
ΔTm = 12.9 °C
__
  • Decrease c-MYC expression.

  • Interfere with the binding of c-MYC G4 with NM23-H2.

  • Inhibit proliferation of SiHa cells in a dose-dependent manner.

[110]
43 Binding affinity to NM23-H2 protein (KD = 3.1 μM) No
  • Decreases c-MYC expression by disrupting the interaction between NM23-H2 and c-MYC G4.

  • Induces cell cycle arrest and apoptosis.

  • Cytotoxicity activity in different cancer cells.

  • Inhibits tumor growth in a cervical squamous cancer xenograft mouse model.

[111]
44 KD = 1.3 μM Yes
  • Decreases c-MYC expression.

  • Cytotoxicity activity in different cancer cells (IC50 = 0.7–0.9 µM).

  • Inhibits tumor growth in a breast cancer xenograft mouse model.

[114]
45 ΔTm = 15 °C Yes
  • Decreases c-MYC expression.

  • Cytotoxicity activity in melanoma cells (IC50 = 2.2 µM).

  • Induces apoptosis.

  • Inhibits tumor growth in a melanoma mouse model.

[115]
46 Ka = 9.9 × 105 M−1 Yes
  • Decreases c-MYC expression.

[116]
47 Ka = 106.1 M−1 No
  • Acts as dual G4 binder/PARP inhibitor.

  • Cytotoxicity activity in HCC1937 cells (IC50 = 19.4 µM).

  • Inhibits tumor growth in a breast cancer xenograft mouse model.

[117,118]
48 Yes
  • Decreases c-MYC expression.

  • Antiproliferative activity in different myeloma cell lines (IC50 = 5.8 µM).

[119,120]
49 ΔTm = 7.5 °C Yes
  • Decreases c-MYC expression.

  • Cytotoxicity activity in myeloma cells (IC50 =3.4 µM).

[121]
Flexible ligands 52 ΔTm = 22 °C Yes
  • Decreases c-MYC expression.

  • Cytotoxicity activity in HeLa cells (IC50 = 3.8 µM) and in A549 cells (IC50 =3.2 µM).

[122]
53
54
ΔTm = 15.0 °C
ΔTm = 6.0 °C
No
  • Decrease c-MYC expression.

  • Cytotoxic activity in MCF-7 cells (IC50 = 3.80 and 7.1 µM, respectively).

- [124,125]
Metal complexes 56
57
58
59
ΔTm = 10.2 °C
ΔTm = 15.6 °C
ΔTm = 2.0 °C
ΔTm = 7.3 °C
No
  • Decrease c-MYC expression.

[128]
60
61
__
  • Decrease c-MYC expression.

  • Cytotoxic activity in Hep-G2 cells (IC50 = 10.1 and 5.1 µM, respectively).

[129]