Table 1.
Genomic regions identified as signatures of selection in three breeds overlapped with QTL database.
| Fst Top 1% Overlaps Candidate Regional Genes and Traits with Porcine QTL | ||||||
|---|---|---|---|---|---|---|
| Group | CHR | START | END | FST | QTL | Genes |
| YN_DLY | Chr.1 | 26,823,251 | 26,823,255 | 0.93663199 | Triglyceride level QTL (56,029) | DOLK, CRAT, PTPA, DOLPP1 |
| Chr.12 | 28,689,860 | 28,689,864 | 0.73554397 | Hemoglobin QTL (22,161) | PNPO | |
| Chr.12 | 29,033,566 | 29,033,570 | 0.61874989 | Loin muscle depth QTL (255,351) | NPEPPS, OSBPL7, SRCN2 | |
| Chr.14 | 136,511,430 | 136,511,434 | 0.93663199 | Number of mummified pigs QTL (178,885) | MYOF, CEP55, ADAM12, | |
| YN_HN | Chr.8 | 38,946,696 | 38,946,700 | 0.93663199 | Litter size QTL (130,289) | DCUN1D4, SPATA18, PAICS, PPAT |
| Chr.11 | 47,893,515 | 47,893,519 | 0.61874989 | Intramuscular fat content QTL (147,429) | UCHL3, KATNAL1 | |
| HN_DLY | Chr.1 | 100,049,958 | 141,109,887 | 0.93663199 | Ear weight QTL (8853) | MAPK4 |
| Chr.4 | 77,799,657 | 77,799,661 | 0.93663199 | Humerus length QTL (57,328) | UBE2V2 | |
| Chr.4 | 79,493,441 | 79,493,445 | 0.61874989 | Feed conversion ratio QTL (139,907) | ST18 | |
| Chr.6 | 145,288,072 | 145,288,076 | 0.73554397 | Linolenic acid content QTL (193,502) | PIEZO1, ACSF3, CTU2 | |