Table 3.
Significant SNPs associated with wool traits.
| Traits | SNP Name | Chr. | Position (bp) 1 | Alleles | p-Value | Significance Level |
Associated Genes |
|---|---|---|---|---|---|---|---|
| FD | rs399017576 | 17 | 3977229 | T/C | 1.03 × 10−7 | GW | TRIM2, MND1, TLR2, RNF175, LOC101122892, LOC106991694 |
| FD | rs416693666 | 3 | 124062538 | G/A | 1.34 × 10−5 | CW | CEP290, TMTC3 |
| FD | rs402446375 | 8 | 32939307 | C/T | 1.97 × 10−5 | CW | - |
| SL | rs399379059 | 12 | 43077532 | T/C | 1.12 × 10−5 | CW | RERE, SLC45A1, LOC101118971, LOC105609137 |
| SL | rs420575132 | 1 | 203515469 | G/A | 2.30 × 10−5 | CW | SOX2, LOC105603067 |
| YFD | rs427654794 | 2 | 57719968 | T/C | 1.55 × 10−5 | CW | - |
| YSL | rs419440256 | 12 | 48639405 | C/T | 1.17 × 10−5 | CW | MORN1, SKI, FAAP20, PRKCZ, GABRD, CFAP74, CALML6, TMEM52, LOC106991467, LOC106991455, LOC105616534, LOC105609719 |
1 SNP position based on OAR_v4.0; significance level is designated as either genome-wide (GW) or chromosome-wide (CW).