AS	ankylosing spondylitis
ASL	argininosuccinate lyase
BMD	bone mineral density
CD	Crohn’s disease
CTX	C-terminal telopeptide of type 1 collagen
FMT	fecal microbiota transplant
FXR	farnesoid X receptor
GI	gastrointestinal tract
GLP-1	glucagon-like peptide-1
GnRH	gonadotropin-releasing hormone
H2S	hydrogen sulfide
IBD	inflammatory bowel disease
ICAM-1	intracellular adhesion molecule-1
IELs	intraepithelial lymphocytes
IFNgamma	interferon gamma
IgA	Immunoglobulin A
IL-10	interleukin 10
IL-6	interleukin 6
IL1-beta	interleukin 1 beta
ILCs	innate lymphoid cells
LCA	monohydroxylated secondary lithocholic acid
LPS	lipopolysaccharide
M-CSF	macrophage colony stimuation factor
MAIT	mucosa-associated invariant T cell
MCP-1	monocyte chemoattractant protein 1
Ovx	ovarectomy
PNAd	peripheral lymph node addressins
PSGL-1	P-selectin glycoprotein ligand-1
PTH	parathyreoid hormone
RA	rheumatoid arthritis
RANKL	Receptor activator of nuclear factor kappa-Β ligand
SCFA	short chain fatty acid
SFB	Segmented filamentous bacteria
SpA	spondyloarthropathies
T1D	Typ 1 Diabetes
TGF-beta	transforming growth factor beta
TGR5	G protein-coupled bile acid receptor 5
Th17	T helper 17 cell
TLR	Toll-like receptor
TMAO	trimethylamine N-oxide
TNF-alpha	tumor necrosis factor alpha
Tregs	regulatory T cells
TRM	T resident memory cell
UC	ulcerative colitis
VAP-1	vascular adhesion protein-1
VDR	vitamin D receptor
VEGF	vascular endothelial growth factor