TABLE 1.
Performance metrics of 3Mint for the BRCA molecular subtype classification problem. This output table of 3Mint also presents number of cumulative groups, number of unique genes, average gene number.
Cumulative group # | # Of unique gene | Average gene # | Accuracy | Specificity | Sensitivity | Area under curve |
---|---|---|---|---|---|---|
1 | 54 | 4.67 | 0.88 ± 0.05 | 0.74 ± 0.11 | 0.96 ± 0.04 | 0.91 ± 0.06 |
2 | 67 | 9.34 | 0.89 ± 0.05 | 0.75 ± 0.11 | 0.96 ± 0.04 | 0.92 ± 0.07 |
3 | 76 | 15.06 | 0.89 ± 0.05 | 0.77 ± 0.11 | 0.95 ± 0.04 | 0.93 ± 0.06 |
4 | 77 | 21.09 | 0.89 ± 0.05 | 0.78 ± 0.12 | 0.95 ± 0.04 | 0.94 ± 0.05 |
5 | 81 | 29.72 | 0.9 ± 0.04 | 0.79 ± 0.11 | 0.95 ± 0.04 | 0.94 ± 0.05 |
6 | 81 | 36.42 | 0.9 ± 0.04 | 0.8 ± 0.11 | 0.95 ± 0.04 | 0.95 ± 0.04 |
7 | 82 | 49.83 | 0.91 ± 0.04 | 0.82 ± 0.1 | 0.96 ± 0.04 | 0.95 ± 0.04 |
8 | 82 | 60.59 | 0.91 ± 0.03 | 0.83 ± 0.1 | 0.96 ± 0.04 | 0.96 ± 0.03 |
9 | 82 | 72.09 | 0.91 ± 0.03 | 0.83 ± 0.09 | 0.95 ± 0.04 | 0.96 ± 0.03 |
10 | 82 | 83.30 | 0.91 ± 0.03 | 0.83 ± 0.08 | 0.95 ± 0.04 | 0.96 ± 0.03 |