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Enterococcus species recovered from fecal samples collected from sows (n = 14), and weaning (n = 15) and finishing (n = 12) pigs. (A) Prevalence of Enterococcus species. (B) Antimicrobial resistance gene profiles of Enterococcus isolates. (C) Core-genome-based phylogenetic tree of E. faecium (n = 12), E. faecalis (n = 6), and E. hirae (n = 15) recovered from different pig production stages.
