Table A3.
General data of miRNA sequencing analysis using the QuickMIRSeq pipeline. SD, standard deviation.
| Sample ID | Total Reads | Mapping of Reads | miRNA Reads with Mismatches | miRNA Reads Percent, % | Number of Detected miRNAs | ||||
|---|---|---|---|---|---|---|---|---|---|
| miRNA | Hairpin | Small RNA | mRNA | Unaligned | |||||
| s036 | 1,165,274 | 1,117,965 | 2836 | 12,043 | 8761 | 23,669 | 344,026 | 95.9 | 370 |
| s042 | 1,100,541 | 1,030,507 | 2623 | 18,603 | 14,365 | 34,443 | 297,986 | 93.6 | 392 |
| s079 | 914,435 | 872,406 | 1977 | 12,413 | 8763 | 18,876 | 238,428 | 95.4 | 345 |
| s088 | 1,102,220 | 1,042,286 | 2904 | 22,261 | 12,434 | 22,335 | 289,753 | 94.6 | 375 |
| s103 | 1,182,208 | 1,139,684 | 2431 | 9289 | 7835 | 22,969 | 326,821 | 96.4 | 363 |
| s059 | 1,532,840 | 1,466,275 | 4026 | 16,727 | 11,048 | 34,764 | 422,644 | 95.7 | 395 |
| s072 | 915,760 | 865,582 | 2588 | 15,594 | 9119 | 22,877 | 244,713 | 94.5 | 349 |
| s090 | 942,666 | 875,093 | 2443 | 28,093 | 14,777 | 22,260 | 239,741 | 92.8 | 347 |
| s093 | 909,835 | 872,580 | 2287 | 10,764 | 6145 | 18,059 | 253,796 | 95.9 | 355 |
| s110 | 1,128,444 | 1,077,174 | 2723 | 11,169 | 9443 | 27,935 | 309,206 | 95.5 | 366 |
| Mean | 1,089,422 | 1,035,955 | 2684 | 15,696 | 10,269 | 24,819 | 296,711 | 95.0 | 366 |
| SD | 190,718 | 186,420 | 544 | 5928 | 2826 | 5807 | 58,117 | 1.1 | 18 |