Figure 2.
Initial (left) and final (right) arrangements corresponding to the second step (systems 2-1 to 2-6) for systems containing (A) POPC/CHOL, (B) POPE/CHOL, (C) POPS/CHOL, (D) PI-3P/CHOL, (E) BMGP/CHOL and (F) PSM/CHOL in the presence of 0.15 M NaCl (MD time 450 ns). The peptides are shown in both ribbon and surface transparent drawing style with coloured secondary structures (white (coil), violet (helix), yellow (extended), light blue (turns)). The surrounding phospholipid phosphate atoms are shown in VDW drawing style (orange). The water molecules and the chloride and sodium ions have been removed for clarity.