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Various quantitation methods performed on proteins containing inconsistent peptides. The 'peptides' column shows the abundance of individual peptides for each example protein (ACO2, RRS1, and PGM1). The columns 'medians', 'sums', and 'top3′ show the quantitation result for each respective method, as calculated by the scp package. Note the difference between each method, particularly the median method and sum/top3.
