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. 2022 Jan 3;38(6):1729–1731. doi: 10.1093/bioinformatics/btab870

Fig. 1.

Fig. 1.

Pairs format and common types of queries for Pairs. (a) Pairs format, (b) comparison of search space between conventional 1D sorting and the 2D sorting adopted by Pairs and Pairix, for three types of queries over pairs of genomic loci. In all three scenarios, using a 2D sorted file involves a smaller search space