Table 4.

The 25 aphid ortholog proteins that were identified with PCA as having the greatest magnitude of up-regulation in the bacteriocyte compared to the body for both aphid species.

Mp gene	Ap gene ID	NCBI protein name	Mp LogFC	Ap LogFC
g23997	100167607	SP1	5.78	7.94
g16265	100163669	RlpA family protein-like precursor	5.74	7.53
g10610	100159197	cystathionine gamma-lyase isoform 1	5.57	6.48
g11338	100160627	protein draper isoform X1	5.55	7.06
g25444	100568670	plexin A3	5.49	7.63
g7735	100169049	uncharacterized protein LOC100169049 isoform X1	5.48	2.53
g22717	100166357	organic cation transporter protein	5.40	7.55
g7417	100575173	plexin-A3	5.40	7.60
g18732	100164129	SP3	5.25	7.37
g20745	100168678	neprilysin-21 isoform X1	5.23	7.02
g11139	100169458	facilitated trehalose transporter Tret1	5.19	7.33
g18635	100167419	acetyl-coenzyme A transporter 1	5.18	7.88
g13201	100164813	major facilitator superfamily domain-containing protein 6 isoform X1	5.14	6.19
g15906	100164131	acetyl-coenzyme A transporter 1 isoform X1	5.12	4.95
g11347	100161188	leucine-rich repeat-containing protein 15	5.08	6.15
g13798	100160909	uncharacterized protein LOC100160909 precursor	5.01	7.05
g24975	100162203	uncharacterized protein LOC100162203	4.99	6.63
g26344	100168152	sialin	4.96	5.86
g19207	100169490	acetyl-coenzyme A transporter 1	4.92	7.31
g16824	100161021	facilitated trehalose transporter Tret1	4.90	7.89
g2999	100569384	E3 ubiquitin-protein ligase MARCH2-like isoform X1	4.90	6.36
g16263	100570509	uncharacterized protein LOC100570509	4.87	7.67
g27533	100164029	decaprenyl-diphosphate synthase subunit 2	4.83	6.80
g16264	100570300	uncharacterized protein LOC100570300	4.72	8.00
g16266	100165005	uncharacterized protein LOC100165005 precursor	4.38	8.02

All proteins in the table were significantly up-regulated in each aphid species (Mp M. persicae and Ap A. pisum) where FDR adjusted p-values were ≤ 0.05 with ≥ 1.5-fold change (FC). Bolded proteins indicate those that are characterized with annotations in NCBI.