Skip to main content
. 2023 Apr 4;42(4):112395. doi: 10.1016/j.celrep.2023.112395
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

Anti human CD3 monoclonal antibody (clone: OKT3), Alexa Fluor™ 700 eBioscience Cat. # 56-0037-42
Anti human CD8a monoclonal antibody (clone: OKT8) APC-eFluor™ 780 eBioscience Cat. # 47-0086-42
Fixable Viability Dye eFluor 506 eBioscience Cat. # 65-0866-14
Anti human CD45RA monoclonal antibody (clone: HI100) Super Bright™ 645 eBioscience Cat. # 64-0458-42
Anti human CD45RO monoclonal antibody (clone: UCHL1) PE-eFluor™ 610 eBioscience Cat. # 61-0457-42
Anti human CD27 monoclonal antibody (clone: O323) Super Bright™ 780 eBioscience Cat. # 78-0279-42
Anti human CD57 monoclonal antibody (clone:
QA17A04) Brilliant Violet 711™
BioLegend Cat. # 393328
Anti human IFNγ monoclonal antibody (clone: 4S.B3) FITC eBioscience Cat. # 11-7319-82
Anti human TNFα monoclonal antibody (clone: MAb11) PE-Cyanine7 eBioscience Cat. # 25-7349-82
Anti human IL-2 monoclonal antibody (clone: MQ1-17H12) APC eBioscience Cat. # 17-7029-82
Anti human Granzyme B monoclonal antibody (clone: N4TL33) PE eBioscience Cat. # 12-8896-42
Fixable Viability Dye eFluor™ 780 eBioscience Cat. # 65-0865-14
Anti human KIR2D monoclonal antibody (clone: NKVFS1) FITC Miltenyi Biotec Cat. # 130-092-687
Anti human CD8a monoclonal antibody (clone: RPA-T8) PerCP-Cyanine5.5 eBioscience Cat. # 45-0088-42
Anti human CD45 monoclonal antibody (clone: HI30) PE-Cyanine7 eBioscience Cat. # 25-0459-42
Anti human HLA-A2 monoclonal antibody (clone: BB7.2) PE-Cyanine7 eBioscience Cat. # 25-9876-42
Anti human HLA-A3 monoclonal antibody (clone: GAP.A3) APC eBioscience Cat. # 17-5754-42
Anti human CD3 monoclonal antibody (clone: OKT3) FITC eBioscience Cat. # 11-0037-42
Anti human CD4 monoclonal antibody (clone: OKT4) PerCP-Cyanine5.5 eBioscience Cat. # 45-0048-42
Anti human CD96 (TACTILE) monoclonal antibody (clone: NK92.39) PE-Cyanine7 BioLegend Cat. # 338415
Anti human CD197 (CCR7) monoclonal antibody (clone: G043H7) Brilliant Violet 421™ BioLegend Cat. # 353207
Anti human CD7 monoclonal antibody (clone: REA1244) PerCP-Vio® 700 Miltenyi Biotec Cat. # 130-124-937
Anti mouse CD45.1 monoclonal antibody (clone: A20) FITC eBioscience Cat. # 11-0453-82
Anti human IRF4 monoclonal antibody (clone:REA201) PE-Vio770 Miltenyi Biotec Cat. # 130-100-909
Anti human CD134 (OX40) monoclonal antibody (clone: ACT35) PE Miltenyi Biotec Cat. # 130-116-488
Anti human CD25 monoclonal antibody (clone: REA570) APC-Vio770 Miltenyi Biotec Cat. # 130-123-469
Anti human CD137 monoclonal antibody (clone: 4B4-1) APC BioLegend Cat. # 309810
Anti human CD107a monoclonal antibody (clone: REA792) FITC Miltenyi Biotec Cat. # 130-111-620

Bacteria and virus strains

WT MCMV (MW97.01) In house produced Wagner et al.,48
mCMV-N4 In house produced Lemmermann et al., 201028
mCMV-YLQPRTFLL In house produced N/A
mCMV- GILGFVFTL In house produced N/A
GS1783 bacteria In house produced Tischer et al., 201049

Biological samples

PBMCs Collected in this study N/A

Chemicals peptides and recombinant proteins

Brefeldin A eBioscience Cat. # 00-4506-51
Histopaque 1077 Sigma Aldrich Cat. # 10771
Phorbol myristate acetate (PMA) InvivoGen Cat. # tlrl-pma
Ionomycin InvivoGen Cat. # inh-ion
YLQPRTFLL peptide JPT Peptide Technologies N/A
GILGFVFTL peptide JPT Peptide Technologies N/A
PepTivator Influenza A (H1N1) HA Miltenyi Biotec 130-099-803
PepTivator SARS-CoV-2 Prot_S Miltenyi Biotec 130-126-701

Critical commercial assays

Intracellular Fixation & Permeabilization Buffer Set eBioscience Cat. # 88-8824-00
Super Bright Complete Staining Buffer eBioscience Cat. # SB-4401-75

Deposited data

RNA sequencing data GEO GEO: GSE202262

Experimental Models: Organisms

Mouse: NSG-HLA:A02 transgenic The Jackson Laboratory Strain code: 9617

Oligonucleotides

ie2_FLU_fwd (BAC mutagenesis) CTT TCT CTT GAC CAG AGA CCT GGT GAC CGT CAG GAA GAA GAT TCA GCC TCT GAC TAA GGG GAT TTT AGG ATT TGT GTT CAC GCT CTG AGA GGA CAC GAG GAC GCA TCG TGG CCG GAT CTC Metabion GmbH N/A
ie2_FLU_rev (BAC mutagenesis) CCT CTT TAT TTA TTG ATT AAA AAC CAT GAC ATA CCT CGT GTC CTC TCA GAG CGT GAA CAC AAA TCC TAA AAT CCC CTT AGT CAG AGG CTG AAT CTT CTT CCG TGA CCA CGT CGT GGA ATG C Metabion GmbH N/A
ie2_COVID-19_fwd (BAC mutagenesis) CTT TCT CTT GAC CAG AGA CCT GGT GAC CGT CAG GAA GAA GAT TCA GTG CAG CTT ATT ATG TTA TCT TCA ACC TAG GAC TTT TCT ATT ATG AGA GGA CAC GAG GAC GCA TCG TGG CCG GAT CTC Metabion GmbH N/A
CCT CTT TAT TTA TTG ATT AAA AAC CAT GAC ATA CCT CGT GTC CTC TCA TAA TAG AAA AGT CCT AGG TTG AAG ATA ACA TAA TAA GCT GCA CTG AAT CTT CTT CCG TGA CCA CGT CGT GGA ATG C Metabion GmbH N/A

Recombinant DNA

mCMV BAC plasmid pSM3fr In house produced Tischer et al., 201049

Software and algorithms

Flow Jo FLOWJO, LLC (Tree Star) v10.8.1
GraphPad Prism GraphPad Software v8.3.0
Cytoscape Cytoscape.org v3.9.1
STRING EMBL V11.5