Table 2. Results of docking trials.

Target	Model	Docking spheres†	Copies placed‡	LLG score§	MapCC§	Run time¶ (s)
GABA receptor	4cof chain A (291–447; membrane domain)	1	5/5	6070–5830	0.765–0.762	485
	AF model of megabody	6	2/5	409, 355	0.367–0.363	1917
β-Galactosidase	1jz7 chain A	1	4/4	25424–24628	0.823–0.822	711
	5a1a chain A	1	4/4	25600–24827	0.827–0.818	726
	5a1a chain A β-barrel domain (626–726)	5	4/4	1730–1729	0.789–0.789	1479
Apoferritin	5xb1 chain A	1	24/24	2992–2988	0.848–0.847	905
	2cei (5–159)	1	24/24	2078–2072	0.739–0.738	819
Respiratory complex	3rko chains AJKLMN (membrane domain)	1	1/1	651	0.347	522
	3rko chain N	4	1/1	601	0.464	424
	3rko chain M	4	1/1 (1)	257 (185)	0.406 (0.279)	733
	3rko chain L (1–546)	4	0/1 (2)	(135, 84)	(0.280, 0.265)	616
	7nyu chain M	4	1/1 (1)	213 (148)	0.395 (0.273)	771
MutS	6i5f chain A (12–116)	214	0/2 (5)	(49–37)	(0.378–0.215)	1024
	6i5f chain A (566–799)	26	2/2	213, 207	0.628, 0.614	221
CFTR ΔF508 mutant	AF (4–263, 282–379, 844–871, 933–1170; membrane domain)	1	1/1	704	0.645	122
	AF (264–281, 1204–1429)	10	1/1 (1)	297 (188)	0.642 (0.549)	806
	AF (391–400, 440–633)	18	1/1 (1)	220 (134)	0.647 (0.533)	673
Get3, closed	7spz	1	2/2	439, 300	0.696, 0.643	32

^†Number of subvolume spheres used for docking search; 1 for a single sphere covering the entire reconstruction.

^‡Number of copies placed correctly (or incorrectly in parentheses).

^§MapCC is the map correlation coefficient between the weighted map and a map computed from the model. Scores for incorrectly placed copies are in parentheses.

^¶Linux workstation with a 3.8 GHz Intel Core i7-9800X CPU with eight cores but running primarily on a single thread.