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. 2023 Feb 15;12:e82015. doi: 10.7554/eLife.82015

Table 1. Data collection, image processing, and structure characteristics summary.

Map Skeletal muscle α-actin Cardiac muscle α-actin β-actin γ-actin
Data collection
Microscope FEI Titan Krios G3i FEI Titan Krios G3i FEI Titan Krios G3i FEI Titan Krios G3i
Voltage (kV) 300 300 300 300
Detector Gatan K3 Gatan K3 Gatan K3 Gatan K3
Automation software EPU EPU EPU EPU
Energy filter slit width (eV) 20 20 20 20
Recording mode Super-resolution Super-resolution Super-resolution Super-resolution
Magnification (nominal) 81,000 81,000 81,000 81,000
Movie micrograph pixel size (Å) 0.891 0.891 0.891 0.891
Total Dose rate (e2) 65 60 50 65
Defocus range (µm) –0.5 to –2.5 –0.5 to –2.5 –0.5 to –2.5 –0.5 to –2.5
Spherical aberration (mm) 0.01 0.01 0.01 0.01
Movies 2046 1444 1352 2952
Total extracted particles 261,195 657,300 279,120 1,249,379
Total # of refined particles 185,406 657,041 263,911 1,009,372
Reconstruction
EMDB code EMD-27548 EMD-27549 EMD-27572 EMD-27565
Box size 350 256 256 256
Symmetry helical helical C1 C1
Map sharpening B-factor (Å2) –90 –149 –81 –201
Resolution (global) (Å) 3.37 3.07 2.99 3.38
Structure building and validation
PDB ID 8 DMX 8DMY 8DNH 8DNF
Model building Coot Coot Coot Coot
Refinement program Phenix Phenix Phenix Phenix
Refinement target Real-space Real-space Real-space Real-space
RMSD from ideal values
Bond length (Å) 0.02 0.02 0.04 0.03
Bond Angles (0) 0.493 0.494 0.761 0.711
Ramachandran favored (%) 97.61 96.68 96.21 96.20
Ramachandran allowed (%) 2.39 3.32 3.79 3.46
Ramachandran outliers (%) 0 0 0 0.34
MolProbity Score 1.42 1.42 1.72 1.72
Structures Characteristics
Species Rabbit Bovine Human Human
Amino acid resolved 4–375 2–375 1–374 1–374
PTMs resolved H73 H73 D1/H72 E1/H72