Table 4.
A list of candidate genes for being AvrLr19.
| Gene_name | Chr | Gene_start | Gene_end | Gene_length | Association type | SignalP D score | Effector p |
|---|---|---|---|---|---|---|---|
| PTTG_27471 | ADAS02000057.1 | 14,998 | 15,372 | 375 | SNP | 0.662 | 0.882 |
| PTTG_12441 | ADAS02000035.1 | 163,086 | 164,553 | 1,227 | SNP | 0.764 | 0.878 |
| PTTG_28324 | ADAS02000101.1 | 313,403 | 315,005 | 1,384 | SNP | 0.591 | 0.621 |
| PTTG_26499 | ADAS02000024.1 | 315,857 | 316,639 | 698 | SNP | 0.703 | 0.523 |
| PTTG_06910 | ADAS02000138.1 | 17,746 | 19,966 | 1,748 | SNP | 0.603 | - |
| PTTG_26516 | ADAS02000024.1 | 908,360 | 908,725 | 366 | SNP | 0.506 | 0.506 |
| PTTG_03570 | ADAS02000017.1 | 494,282 | 495,594 | 1,072 | Indel | 0.713 | 0.606 |
| PTTG_04779 | ADAS02000024.1 | 830,568 | 832,307 | 1,739 | DEG | 99.08 | 0.908 |
Chr, Chromosome. SignalP D scores > 0.45 were considered positive predictions. Effector p > 0.50 were considered positive predictions.