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. 2023 Mar 22;14:1135872. doi: 10.3389/fmicb.2023.1135872

Table 2.

Genetic comparisons between strain RST and R. pseudosolanacearum LMG 9673T, and type species in the genus Ralstonia.

Strain RST R. pseudosolanacearum LMG 9673T G + C contentb
16S rRNAsa ANIbb ANImb DDH1c DDH2c DDH3c 16S rRNAa ANIbb ANImb DDH1c DDH2c DDH3c
RST 100.00 100.00 100.00 100.00 100.00 100.00 99.50 95.30 96.15 73.40 66.20 74.50 67.10
R. pseudosolanacearum LMG 9673T 99.50 95.23 96.14 73.40 66.20 74.50 100.00 100.00 100.00 100.00 100.00 100.00 66.60
R. syzygii subsp. syzygii LMG 10661T 97.18 91.18 93.00 51.40 48.80 51.10 96.97 90.96 92.73 47.70 47.30 47.50 66.50
R. syzygii subsp. indonesiensis LMG 27703T 99.50 91.41 92.84 65.70 47.50 63.00 99.28 90.93 92.50 58.60 45.60 56.50 66.30
R. solanacearum K60-1T 99.28 89.69 91.64 58.60 42.20 55.40 99.57 89.62 91.56 57.60 41.80 54.50 66.40
R. mannitolilytica LMG 6866T 97.40 83.00 86.72 36.30 27.70 33.30 97.33 83.00 86.77 35.10 27.60 32.30 65.80
R. soli 21MJYT02-11T 97.62 83.08 86.87 33.00 27.60 30.70 97.48 83.20 86.87 31.60 27.70 29.60 64.10
R. insidiosa CCUG 46789T 97.26 82.80 86.46 34.00 26.90 31.30 97.33 82.82 86.49 32.30 26.90 30.00 63.70
R. wenshanensis 56D2T 97.69 82.49 86.36 35.40 26.70 32.30 97.55 82.56 86.38 33.20 26.70 30.60 63.70
R. pickettii K-288T 97.26 82.57 86.27 36.60 26.60 33.10 97.11 82.69 86.26 35.20 26.50 32.10 63.90
R. chuxiongensis 21YRMH01-3T 97.26 82.26 86.22 34.70 26.30 31.70 97.11 82.37 86.22 32.80 26.40 30.20 63.50
R. mojiangensis 21MJYT02-10T 97.40 82.36 86.24 35.20 26.20 32.00 97.26 82.36 86.28 33.10 26.30 30.40 63.60

Data are presented as a percentage.

a

The 16S rRNA sequence similarities were calculated using the Clustal Omega multiple alignment package in the EMBL-EBI database (Sievers and Higgins, 2021).

b

The ANI (ANIb and ANIm) and overall G + C content values were generated using the online service JSpeciesWS (Richter et al., 2015).

c

The dDDH values were yielded using the Genome-to-Genome Distance Calculator (Meier-Kolthoff et al., 2022). 16S rRNAs = 16S rRNA sequence similarity. DDH1 = formula 1. DDH2 = formula 2. DDH3 = formula 3.