Table 2.
Important candidate genes and functional annotations identified in GWAS
| P. cathayana id | P. trichocarpa ida | Traitb | Gene description |
|---|---|---|---|
| Pca02G020350 | Potri.002G214100 | GEBV-PH | Phosphoenolpyruvate carboxylase |
| Pca03G006430 | Potri.003G072600 | GEBV-PH | Alanine aminotransferase 2 |
| Pca04G007700 | NA | GEBV-GD | Transcription factor MYB20 |
| Pca04G010300 | Potri.004G118400 | GEBV-PH | Myb-like DNA-binding domain |
| Pca04G013090 | Potri.004G140900 | GEBV-PH | Cytochrome P450, abscisic acid 8'-hydroxylase 4 |
| Pca05G015040 | Potri.005G164700 | GEBV-GD | Cryptochrome 1 family protein |
| Pca06G009220 | Potri.006G102600 | GEBV-PH, GEBV-GD | Transcription factor bhlh140 |
| Pca06G021060 | Potri.006G236200 | GEBV-PH | Auxin-responsive protein IAA2 |
| Pca12G011040 | Potri.012G126500 | GEBV-GD | NAC domain-containing protein 7 |
| Pca13G013120 | Potri.013G148600 | GEBV-GD | Transcription factor MYB41 |
| Pca17G004590 | Potri.017G053500 | GEBV-PH | Amino acid transport and metabolism |
| Pca18G003350 | Potri.018G036400 | GEBV-GD | Nitrate regulatory gene2 protein |
a Gene models are annotated using v3.1 of the P. trichocarpa genome
b GWAS traits used to localize candidate genes