Additional Table 12.
GO cellular component analysis of filtered mRNAs
| ONTOLOGY | GOID | Description | GeneRatio | BgRatio | pvalue | p.adjust | geneID | Count |
|---|---|---|---|---|---|---|---|---|
| CC | GO:0005578 | proteinaceous extracellular matrix | 28/683 | 365/18399 | 0.00024621 | 0.07164718 | COL14A1/COL17A1/HAPLN3/COL19A1/SERPINF1/TECTA/MMP3/MMP8/FLRT1/WISP1/ENAM/FRAS1/WNT16/FREM3/ELN/CHI3L1/COL5A3/COL4A3/ADAMTS14/ADAMTS19/MMP10/VWF/LRRN3/TNFRSF11B/KAZALD1/MFAP4/MATN3/ITGA6 | 28 |
| CC | GO:0034702 | ion channel complex | 23/683 | 288/18399 | 0.00049174 | 0.07164718 | CHRNE/CHRNA10/TRPC4/KCND1/KCNG2/KCNE3/KCNQ5/LRRC8E/ANO1/GRID2/GRIK5/ABCC9/GABRA2/GABRA5/SCN1A/SCN3B/SCN3A/GRIN2C/GRIN2D/GRIN3A/CLIC6/CLIC2/CATSPER1 | 23 |
| CC | GO:1902495 | transmembrane transportercomplex | 25/683 | 325/18399 | 0.0004987 | 0.07164718 | CHRNE/CHRNA10/TRPC4/KCND1/KCNG2/KCNE3/KCNQ5/LRRC8E/ANO1/GRID2/GRIK5/ABCB6/ABCC9/GABRA2/GABRA5/SCN1A/SCN3B/SCN3A/GRIN2C/GRIN2D/GRIN3A/UQCC3/CLIC6/CLIC2/CATSPER1 | 25 |
| CC | GO:1990351 | transporter complex | 25/683 | 332/18399 | 0.00068024 | 0.07329627 | CHRNE/CHRNA10/TRPC4/KCND1/KCNG2/KCNE3/KCNQ5/LRRC8E/ANO1/GRID2/GRIK5/ABCB6/ABCC9/GABRA2/GABRA5/SCN1A/SCN3B/SCN3A/GRIN2C/GRIN2D/GRIN3A/UQCC3/CLIC6/CLIC2/CATSPER1 | 25 |
| CC | GO:0101003 | ficolin-1-rich granule membrane | 8/683 | 60/18399 | 0.00160995 | 0.13877781 | SLC11A1/SERPINB12/NCKAP1L/ENPP4/ATP6V0C/CD93/PKP1/NFASC | 8 |
| CC | GO:0098802 | plasma membrane receptorcomplex | 15/683 | 177/18399 | 0.00253432 | 0.18204886 | CHRNE/CHRNA10/RAMP1/CARD11/GRID2/GRIK5/ACVR1C/IL6/TLR1/GRIN2C/GRIN2D/GRIN3A/ITGB4/ITGB8/ITGA6 | 15 |
| CC | GO:0005788 | endoplasmic reticulum lumen | 21/683 | 298/18399 | 0.00388676 | 0.23931312 | COL14A1/C3/COL17A1/COL19A1/EBI3/EDN1/CYP2W1/ENAM/COL25A1/APOE/MGAT4A/BCHE/IL6/COL5A3/COL4A3/GHRL/CES1/MELTF/IGFBP5/MATN3/IL12A | 21 |
| CC | GO:0017146 | NMDA selective glutamatereceptor complex | 3/683 | 11/18399 | 0.00672195 | 0.32590943 | GRIN2C/GRIN2D/GRIN3A | 3 |
| CC | GO:0034706 | sodium channel complex | 4/683 | 21/18399 | 0.00680553 | 0.32590943 | GRIK5/SCN1A/SCN3B/SCN3A | 4 |
| CC | GO:0043235 | receptor complex | 21/683 | 325/18399 | 0.0101341 | 0.43677987 | CHRNE/ADRB2/CHRNA10/RAMP1/CARD11/GRID2/GRIK5/FLT4/ACVR1C/IL6/GABRA2/GABRA5/NR1H3/PLXNA4/TLR1/GRIN2C/GRIN2D/GRIN3A/ITGB4/ITGB8/ITGA6 | 21 |
| CC | GO:0001518 | voltage-gated sodium channelcomplex | 3/683 | 14/18399 | 0.0136496 | 0.47861007 | SCN1A/SCN3B/SCN3A | 3 |
| CC | GO:0044420 | extracellular matrix component | 10/683 | 120/18399 | 0.01391592 | 0.47861007 | COL14A1/COL17A1/SERPINF1/FRAS1/FREM3/ELN/COL5A3/COL4A3/MFAP4/ITGA6 | 10 |
| CC | GO:0097060 | synaptic membrane | 19/683 | 295/18399 | 0.01443603 | 0.47861007 | CHRNE/CHRNA10/SNCAIP/TMEM108/BAALC/ANK1/GRID2/GRIK5/GABRA2/GABRA5/SYP/CNKSR2/NDUFS7/GRIN2C/GRIN2D/GRIN3A/DLGAP2/EPHA7/RIMS1 | 19 |
| CC | GO:0030285 | integral component of synapticvesicle membrane | 3/683 | 15/18399 | 0.01659897 | 0.50912388 | TMEM163/GABRA2/SYP | 3 |
| CC | GO:0033267 | axon part | 13/683 | 181/18399 | 0.01771893 | 0.50912388 | SERPINF1/L1CAM/TMEM108/MGARP/NRG1/ANK1/GRIK5/SLC1A2/SCN1A/SYP/UCN/HAP1/NFASC | 13 |
| CC | GO:0030673 | axolemma | 3/683 | 16/18399 | 0.01987621 | 0.53431783 | NRG1/ANK1/SLC1A2 | 3 |
| CC | GO:0045211 | postsynaptic membrane | 15/683 | 225/18399 | 0.02107518 | 0.53431783 | CHRNE/CHRNA10/TMEM108/BAALC/ANK1/GRID2/GRIK5/GABRA2/GABRA5/CNKSR2/GRIN2C/GRIN2D/GRIN3A/DLGAP2/EPHA7 | 15 |
| CC | GO:0030175 | filopodium | 8/683 | 96/18399 | 0.02629834 | 0.58544602 | TRPV4/ACPP/PPP1R9A/CXADR/LCP1/ACTA2/CD302/ITGA6 | 8 |
| CC | GO:0034703 | cation channel complex | 14/683 | 212/18399 | 0.02711827 | 0.58544602 | TRPC4/KCND1/KCNG2/KCNE3/KCNQ5/GRIK5/ABCC9/SCN1A/SCN3B/SCN3A/GRIN2C/GRIN2D/GRIN3A/CATSPER1 | 14 |
| CC | GO:0008328 | ionotropic glutamate receptorcomplex | 5/683 | 46/18399 | 0.02716687 | 0.58544602 | GRID2/GRIK5/GRIN2C/GRIN2D/GRIN3A | 5 |
| CC | GO:0044304 | main axon | 6/683 | 63/18399 | 0.0290586 | 0.59639312 | NRG1/ANK1/SLC1A2/SCN1A/UCN/NFASC | 6 |
| CC | GO:0098878 | neurotransmitter receptorcomplex | 5/683 | 48/18399 | 0.03196607 | 0.62624432 | GRID2/GRIK5/GRIN2C/GRIN2D/GRIN3A | 5 |
| CC | GO:0034707 | chloride channel complex | 5/683 | 49/18399 | 0.03455175 | 0.64746977 | ANO1/GABRA2/GABRA5/CLIC6/CLIC2 | 5 |
| CC | GO:0070820 | tertiary granule | 11/683 | 163/18399 | 0.0408761 | 0.67918917 | SLC11A1/MMP8/SERPINB12/NCKAP1L/ENPP4/CXCL1/ATP6V0C/METTL7A/CD93/PKP1/NFASC | 11 |
| CC | GO:0032809 | neuronal cell body membrane | 3/683 | 21/18399 | 0.04118619 | 0.67918917 | FLRT1/KCNE3/GABRA5 | 3 |
| CC | GO:0044298 | cell body membrane | 3/683 | 21/18399 | 0.04118619 | 0.67918917 | FLRT1/KCNE3/GABRA5 | 3 |
| CC | GO:0005581 | collagen trimer | 7/683 | 88/18399 | 0.04507474 | 0.67918917 | COL14A1/COL17A1/COL19A1/COL25A1/COL5A3/COL4A3/C1QL3 | 7 |
| CC | GO:0016528 | sarcoplasm | 6/683 | 70/18399 | 0.0452783 | 0.67918917 | ANK1/JPH2/FABP3/CLEC18B/GSTM2/MRVI1 | 6 |
| CC | GO:0098563 | intrinsic component of synapticvesicle membrane | 3/683 | 22/18399 | 0.04641385 | 0.67918917 | TMEM163/GABRA2/SYP | 3 |
| CC | GO:0070382 | exocytic vesicle | 11/683 | 167/18399 | 0.04727535 | 0.67918917 | TRIM9/SNCAIP/TMEM163/SLC18A2/SLC40A1/SYN2/STX11/GABRA2/SYP/SYTL3/HAP1 | 11 |