Table 2.
Presence of cultured microorganisms in the 16S rRNA sequencing data (genus level)
Number | Kingdom | Phylum | Class | Order | Family | Genus | Presence in sequencing resultsa |
---|---|---|---|---|---|---|---|
1 | Bacteria | Proteobacteria | Gammaproteobacteria | Aeromonadales | Aeromonadaceae | Aeromonas | Yes |
2 | Bacteria | Actinobacteria | Actinomycetales | Micrococcineae | Microbacteriaceae | Microbacterium | No |
3 | Bacteria | Firmicutes | Bacilli | Bacillales | Bacillaceae | Bacillus | Yes |
4 | Bacteria | Proteobacteria | Gammaproteobacteria | Enterobacteriales | Enterobacteriaceae | Citrobacter | No |
5 | Bacteria | Firmicutes | Bacilli | Bacillales | Paenibacillaceae | Brevibacillus | Yes |
6 | Bacteria | Proteobacteria | Gammaproteobacteria | Enterobacteriales | Yersiniaceae | Serratia | No |
7 | Bacteria | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Delftia | No |
8 | Bacteria | Proteobacteria | Betaproteobacteria | Rhodocyclales | Rhodocyclaceae | Azospira | Yes |
9 | Bacteria | Firmicutes | Bacilli | Bacillales | Bacillaceae | Lysinibacillus | No |
10 | Bacteria | Proteobacteria | Gammaproteobacteria | Xanthomonadales | Xanthomonadaceae | Stenotrophomonas | No |
11 | Bacteria | Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Comamonas | No |
12 | Bacteria | Proteobacteria | Betaproteobacteria | Burkholderiales | Alcaligenaceae | Achromobacter | Yes |
13 | Bacteria | Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | No |
14 | Bacteria | Proteobacteria | Gammaproteobacteria | Enterobacteriales | Enterobacteriaceae | Enterobacter | Yes |
15 | Bacteria | Proteobacteria | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Sulfurospirillum | No |
16 | Bacteria | Firmicutes | Bacilli | Bacillales | Bacillaceae | Fictibacillus | No |
17 | Bacteria | Proteobacteria | Gamma Proteobacteria | Enterobacteriales | Erwiniaceae | Pantoea | No |
18 | Bacteria | Actinobacteria | Actinomycetales | Micrococcales | Micrococcaceae | Micrococcus | No |
19 | Bacteria | Proteobacteria | Gammaproteobacteria | Enterobacteriales | Enterobacteriaceae | Atlantiacter | No |
The 19 genera listed in this table are the results obtained by cultivation
aThe genera that appeared in the 16S rRNA sequencing results were marked as “Yes”, otherwise “No”. Only six genera were appeared in sequencing results