Table 2.

Predicted CTL epitopes from A. baumannii LPS assembly protein (LptD and LptE) to design multi-epitope vaccine construct with their corresponding MHC class I alleles and their immunogenic properties

Uniprot_ID	CTL Epitope	Alleles	Position	Score	Antigencity Score	Immunogenicity	Conservancy	Toxicity	Hydrophobicity	Hydropathicity	Hydrophilicity	Charge	Mol wt.
V5VH20	TDDLETQLK	HLA-A*01:01	50	2.907	1.1947	0.02584	100%	Non-toxin	−0.35	−1.3	0.87	−2	1062.27
	GLVGCGFHL	HLA-A*02:01	19	0.514	1.3983	0.1446	100%	Non-toxin	0.26	1.41	−1.01	0.5	902.22
	GTNPTATPL	HLA-A*03:01	29	7.505	0.8191	0.08765	100%	Non-toxin	−0.04	−0.4	−0.37	0	871.08
	LRLTVTFQI	HLA-A*24:02	98	3.932	1.6349	0.14332	100%	Non-toxin	0.01	1.08	−0.78	1	1090.47
	SAGLVGCGF	HLA-A*26:01	17	7.792	0.9454	0.04624	100%	Non-toxin	0.24	1.46	−0.78	0	810.06
	VLLRLTVTF	HLA-B*08:01	96	1.293	0.6513	0.13174	100%	Non-toxin	0.13	1.86	−0.97	1	1061.47
B0VMX7	QSDEIDYNL	HLA-A*01:01	168	0.662	1.4015	0.25153	100%	Non-toxin	−0.26	−1.26	0.42	−3	1096.24
	KSAPEAQLR	HLA-A*03:01	68	1.182	1.3792	0.03163	100%	Non-toxin	−0.39	−1.16	0.74	1	999.25
	VLAVPYFNF	HLA-A*24:02	258	0.376	2.0269	0.13498	100%	Non-toxin	0.27	1.47	−1.38	0	1069.39
	YDATITPRY	HLA-A*26:01	303	0.676	1.4273	0.23878	100%	Non-toxin	−0.21	−0.81	−0.19	0	1099.32
	LPQFLLNYV	HLA-B*07:02	437	1.514	1.1172	0.05134	100%	Non-toxin	0.15	0.94	−1.26	0	1106.47
	MLQGEFRYL	HLA-B*08:01	318	1.555	0.4306	0.24572	100%	Non-toxin	−0.11	−0.1	−0.39	0	1156.5
	GRTVRADKV	HLA-B*27:05	135	3.095	1.4877	0.03409	100%	Non-toxin	−0.45	−0.81	0.9	2	1001.27
	DKSAPEAQL	HLA-B*39:01	67	0.367	1.1392	0.03446	100%	Non-toxin	−0.27	−1.04	0.74	−1	958.15
	VKDIPVLAV	HLA-B*40:01	253	3.103	1.0029	0.18268	100%	Non-toxin	0.14	1.52	−0.29	0	953.32
	LSVPVYLNL	HLA-B*58:01	291	0.371	1.2858	0.02582	100%	Non-toxin	0.19	1.4	−1.13	0	1017.37
	QTLTPRAFY	HLA-B*15:01	550	1.025	0.8494	0.1748	100%	Non-toxin	−0.16	−0.43	−0.52	1	1096.37