Fig. 2.

Phylogenetic backbone and highlighted genome content in zygomycete fungi. Zygomycete genomes that are well assembled (BUSCO score above 80%) and represent unique phylogenetic positions were selected to reconstruct the backbone phylogenomic tree. (a) The backbone phylogenomic tree of zygomycetes includes 80 taxa (rooted with Drosophila melanogaster). All bootstrap values (out of 100) were labeled on the branches (concordance factors are shown in supplementary fig. S1b, Supplementary Material online). (b–e) Protein family domains found with striking patterns in zygomycete fungi are plotted with the copy numbers individually.