Table 3.
List of the most abundant aptamer sequences obtained after SELEX against Hsp70.
| Apt ID | Sequence 5′→ 3′ with primer region underlined | NGS (%) |
|---|---|---|
| HSe-1[a, b] | GCAGCAGAGATAGACGCTATTTCTTA*GA*CCTTTCTA*A*TTTA*A*CTA*CTCA*A*TGGCA*TA*GCTGGCA*C | 8.37 |
| HSe-2[a, b] | GCAGCAGAGATAGACGCTATTCTCTA*GA*CCTTCTA*A*TTTA*CA*TA*CTCCA*A*TGGCA*TA*GCTGGCA*C | 4.57 |
| HSe-3[a, b] | GCAGCAGAGATAGACGCTAA*GGGA*A*GTA*GGA*A*GA*A*GGGA*TGCCCTGCA*A*TGGCA*TA*GCTGGCA*C | 1.58 |
| HSe-4[a, b] | GCAGCAGAGATAGACGCTAGGA*TCTCA*TA*GTTCTTGTA*A*TGA*TA*CTCCA*A*TGGCA*TA*GCTGGCA*C | 1.47 |
| HSe-5[a, b] | GCAGCAGAGATAGACGCTAA*TCGA*TGA*GA*CCTTCTA*A*TTA*A*CTA*TTCCA*A*TGGCA*TA*GCTGGCA*C | 0.78 |
| HSe-6[a, b] | GCAGCAGAGATAGACGCTATCTCTTA*GA*CCTTCTA*A*TTTA*A*CTA*CTCA*A*TGGCA*TA*GCTGGCA*C | 0.74 |
| HSe-7[a, b] | GCAGCAGAGATAGACGCTAGA*TCTCCA*GTCCTTCTA*A*TTA*A*TA*CTCCA*A*TGGCA*TA*GCTGGCA*C | 0.43 |
| HSe-8[a, b] | GCAGCAGAGATAGACGCTAGTCCTCA*TA*GGCCTTCTA*A*TTA*A*CTA*TTCA*A*TGGCA*TA*GCTGGCA*C | 0.21 |
| HSe-9[a,b] | GCAGCAGAGATAGACGCTAA*GA*CCTCA*TA*GTCCTTCTA*A*TTA*TA*CTCCA*A*TGGCA*TA*GCTGGCA*C | 0.12 |
| HSc-2[c] | GCAGCAGAGATAGACGCTATTCTCTA*GA*CCTTCTA*A*TTTA*CA*TA*CTCCA*A*TGGCA*TA*GCTGGCA*C | |
| HSc-9[c] | GCAGCAGAGATAGACGCTAA*GA*CCTCA*TA*GTCCTTCTA*A*TTA*TA*CTCCA*A*TGGCA*TA*GCTGGCA*C | |
| HSc-9.1[c] | A*GA*CCTCA*TA*GTCCTTCTA*A*TTA*TA*CTCCA*A*TGGCA*TA*GCTGGCA*C |
[a] Reverse complement sequence purchased 5′-biotinylated; [b] 5′-6-FAM-labelled reverse primer used for PEX production of dA*-modified strand; [c] aptamers synthesised both with and without 5′-6-FAM label; HSe enzymatically synthesised; HSc chemically synthesised.